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Bromine in PDB 7mkx: Crystal Structure Analysis of Human CDK2 and CCNA2 Complex

Enzymatic activity of Crystal Structure Analysis of Human CDK2 and CCNA2 Complex

All present enzymatic activity of Crystal Structure Analysis of Human CDK2 and CCNA2 Complex:
2.7.11.22;

Protein crystallography data

The structure of Crystal Structure Analysis of Human CDK2 and CCNA2 Complex, PDB code: 7mkx was solved by H.-S.Seo, S.Dhe-Paganon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 80.76 / 3.08
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 161.05, 161.52, 65.76, 90, 90, 90
R / Rfree (%) 24.6 / 28.9

Other elements in 7mkx:

The structure of Crystal Structure Analysis of Human CDK2 and CCNA2 Complex also contains other interesting chemical elements:

Fluorine (F) 2 atoms

Bromine Binding Sites:

The binding sites of Bromine atom in the Crystal Structure Analysis of Human CDK2 and CCNA2 Complex (pdb code 7mkx). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 2 binding sites of Bromine where determined in the Crystal Structure Analysis of Human CDK2 and CCNA2 Complex, PDB code: 7mkx:
Jump to Bromine binding site number: 1; 2;

Bromine binding site 1 out of 2 in 7mkx

Go back to Bromine Binding Sites List in 7mkx
Bromine binding site 1 out of 2 in the Crystal Structure Analysis of Human CDK2 and CCNA2 Complex


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Crystal Structure Analysis of Human CDK2 and CCNA2 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br301

b:123.9
occ:1.00
BR1 A:ZGY301 0.0 123.9 1.0
C11 A:ZGY301 1.9 96.8 1.0
H10 A:ZGY301 2.6 122.9 1.0
C10 A:ZGY301 2.8 94.9 1.0
C12 A:ZGY301 2.9 98.3 1.0
CD2 A:PHE80 2.9 87.4 1.0
H9 A:ZGY301 2.9 114.7 1.0
N5 A:ZGY301 3.1 101.7 1.0
CE2 A:PHE80 3.7 94.6 1.0
CG A:PHE80 3.8 78.8 1.0
CB A:PHE80 3.8 79.7 1.0
O2 A:ZGY301 4.0 105.3 1.0
N4 A:ZGY301 4.1 89.9 1.0
N7 A:ZGY301 4.1 95.8 1.0
CG1 A:VAL64 4.2 81.8 1.0
CB A:ALA31 4.5 93.5 1.0
C13 A:ZGY301 4.5 100.7 1.0
C9 A:ZGY301 4.6 91.8 1.0
C15 A:ZGY301 4.7 104.5 1.0
CD2 A:LEU134 4.8 93.0 1.0
O A:GLU81 4.9 85.4 1.0
CG2 A:VAL64 4.9 80.7 1.0
CB A:ALA144 4.9 80.7 1.0
CZ A:PHE80 5.0 77.8 1.0

Bromine binding site 2 out of 2 in 7mkx

Go back to Bromine Binding Sites List in 7mkx
Bromine binding site 2 out of 2 in the Crystal Structure Analysis of Human CDK2 and CCNA2 Complex


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Crystal Structure Analysis of Human CDK2 and CCNA2 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Br301

b:367.9
occ:1.00
BR1 C:ZGY301 0.0 367.9 1.0
C11 C:ZGY301 1.9 103.7 1.0
H10 C:ZGY301 2.7 132.9 1.0
C10 C:ZGY301 2.9 106.9 1.0
C12 C:ZGY301 2.9 105.2 1.0
H9 C:ZGY301 2.9 129.1 1.0
N5 C:ZGY301 3.2 110.1 1.0
CG C:PHE80 3.5 77.6 1.0
CB C:PHE80 3.5 77.6 1.0
CD1 C:PHE80 3.5 77.7 1.0
O2 C:ZGY301 3.9 105.2 1.0
N4 C:ZGY301 4.1 95.7 1.0
N7 C:ZGY301 4.1 88.2 1.0
CD2 C:PHE80 4.1 77.6 1.0
CE1 C:PHE80 4.3 77.7 1.0
CD1 C:LEU134 4.5 85.9 1.0
C13 C:ZGY301 4.6 94.0 1.0
CB C:ALA31 4.6 77.8 1.0
C9 C:ZGY301 4.6 85.9 1.0
C15 C:ZGY301 4.7 95.8 1.0
O C:GLU81 4.7 79.8 1.0
CG1 C:VAL64 4.8 82.6 1.0
CE2 C:PHE80 4.8 77.7 1.0
CZ C:PHE80 4.8 77.7 1.0
CB C:ALA144 4.9 78.4 1.0
CB C:VAL64 4.9 78.0 1.0
CG2 C:VAL64 4.9 83.3 1.0
CA C:PHE80 5.0 77.5 1.0

Reference:

H.-S.Seo, S.Dhe-Paganon. Crystal Structure Analysis of Human CDK2 and CCNA2 Complex To Be Published.
Page generated: Thu Jul 11 04:07:45 2024

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