Bromine in PDB 7qwa: Cc-TYPE2-(Ugue)4
Protein crystallography data
The structure of Cc-TYPE2-(Ugue)4, PDB code: 7qwa
was solved by
F.J.O.Martin,
F.Zieleniewski,
W.M.Dawson,
D.N.Woolfson,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
61.55 /
1.54
|
Space group
|
C 1 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
123.965,
36.213,
45.491,
90,
96.74,
90
|
R / Rfree (%)
|
22.7 /
26.6
|
Bromine Binding Sites:
The binding sites of Bromine atom in the Cc-TYPE2-(Ugue)4
(pdb code 7qwa). This binding sites where shown within
5.0 Angstroms radius around Bromine atom.
In total 6 binding sites of Bromine where determined in the
Cc-TYPE2-(Ugue)4, PDB code: 7qwa:
Jump to Bromine binding site number:
1;
2;
3;
4;
5;
6;
Bromine binding site 1 out
of 6 in 7qwa
Go back to
Bromine Binding Sites List in 7qwa
Bromine binding site 1 out
of 6 in the Cc-TYPE2-(Ugue)4
 Mono view
 Stereo pair view
|
A full contact list of Bromine with other atoms in the Br binding
site number 1 of Cc-TYPE2-(Ugue)4 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Br19
b:22.9
occ:1.00
|
BR
|
A:4BF19
|
0.0
|
22.9
|
1.0
|
CZ
|
A:4BF19
|
1.9
|
20.9
|
1.0
|
CE2
|
A:4BF19
|
2.8
|
25.6
|
1.0
|
CE1
|
A:4BF19
|
2.9
|
17.3
|
1.0
|
CD2
|
A:4BF19
|
4.1
|
23.5
|
1.0
|
OE2
|
A:GLU23
|
4.1
|
25.1
|
1.0
|
CD1
|
A:4BF19
|
4.1
|
13.6
|
1.0
|
CD
|
A:GLU23
|
4.2
|
15.7
|
1.0
|
CG
|
A:GLU23
|
4.3
|
10.6
|
1.0
|
OE1
|
A:GLU23
|
4.5
|
22.3
|
1.0
|
CG
|
A:4BF19
|
4.7
|
15.0
|
1.0
|
|
Bromine binding site 2 out
of 6 in 7qwa
Go back to
Bromine Binding Sites List in 7qwa
Bromine binding site 2 out
of 6 in the Cc-TYPE2-(Ugue)4
 Mono view
 Stereo pair view
|
A full contact list of Bromine with other atoms in the Br binding
site number 2 of Cc-TYPE2-(Ugue)4 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Br19
b:35.4
occ:1.00
|
BR
|
B:4BF19
|
0.0
|
35.4
|
1.0
|
CZ
|
B:4BF19
|
1.9
|
19.1
|
1.0
|
CE1
|
B:4BF19
|
2.8
|
19.1
|
1.0
|
CE2
|
B:4BF19
|
2.8
|
20.6
|
1.0
|
O
|
B:HOH208
|
3.9
|
27.7
|
1.0
|
CE
|
E:LYS29
|
4.0
|
38.4
|
1.0
|
CD2
|
B:4BF19
|
4.1
|
15.9
|
1.0
|
CD1
|
B:4BF19
|
4.1
|
18.2
|
1.0
|
CD
|
E:LYS29
|
4.2
|
51.8
|
1.0
|
CG
|
B:GLU23
|
4.3
|
16.6
|
1.0
|
CG
|
E:LYS29
|
4.4
|
33.7
|
1.0
|
CD
|
B:GLU23
|
4.5
|
21.2
|
1.0
|
CB1
|
E:AIB25
|
4.5
|
18.9
|
1.0
|
OE2
|
B:GLU23
|
4.7
|
25.0
|
1.0
|
CG
|
B:4BF19
|
4.7
|
13.9
|
1.0
|
NZ
|
E:LYS29
|
4.8
|
63.4
|
1.0
|
|
Bromine binding site 3 out
of 6 in 7qwa
Go back to
Bromine Binding Sites List in 7qwa
Bromine binding site 3 out
of 6 in the Cc-TYPE2-(Ugue)4
 Mono view
 Stereo pair view
|
A full contact list of Bromine with other atoms in the Br binding
site number 3 of Cc-TYPE2-(Ugue)4 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Br19
b:29.6
occ:1.00
|
BR
|
C:4BF19
|
0.0
|
29.6
|
1.0
|
CZ
|
C:4BF19
|
1.9
|
14.9
|
1.0
|
CE2
|
C:4BF19
|
2.8
|
16.0
|
1.0
|
CE1
|
C:4BF19
|
2.8
|
23.3
|
1.0
|
CG
|
F:LYS29
|
3.6
|
24.0
|
1.0
|
CE
|
F:LYS29
|
3.9
|
42.1
|
1.0
|
OE2
|
C:GLU23
|
4.1
|
25.1
|
1.0
|
CD
|
F:LYS29
|
4.1
|
36.8
|
1.0
|
CD2
|
C:4BF19
|
4.1
|
24.2
|
1.0
|
CD1
|
C:4BF19
|
4.1
|
19.6
|
1.0
|
CD
|
C:GLU23
|
4.2
|
14.8
|
1.0
|
CG
|
C:GLU23
|
4.2
|
11.5
|
1.0
|
CB1
|
F:AIB25
|
4.4
|
15.1
|
1.0
|
O
|
C:HOH102
|
4.4
|
23.4
|
1.0
|
CB2
|
F:AIB25
|
4.7
|
12.7
|
1.0
|
CG
|
C:4BF19
|
4.7
|
16.3
|
1.0
|
OE1
|
C:GLU23
|
4.8
|
20.9
|
1.0
|
CB
|
F:LYS29
|
5.0
|
26.3
|
1.0
|
|
Bromine binding site 4 out
of 6 in 7qwa
Go back to
Bromine Binding Sites List in 7qwa
Bromine binding site 4 out
of 6 in the Cc-TYPE2-(Ugue)4
 Mono view
 Stereo pair view
|
A full contact list of Bromine with other atoms in the Br binding
site number 4 of Cc-TYPE2-(Ugue)4 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Br19
b:23.6
occ:1.00
|
BR
|
D:4BF19
|
0.0
|
23.6
|
1.0
|
CZ
|
D:4BF19
|
1.9
|
14.5
|
1.0
|
CE2
|
D:4BF19
|
2.8
|
21.5
|
1.0
|
CE1
|
D:4BF19
|
2.8
|
16.8
|
1.0
|
CD1
|
D:4BF19
|
4.1
|
15.9
|
1.0
|
CD2
|
D:4BF19
|
4.1
|
18.1
|
1.0
|
OE2
|
D:GLU23
|
4.1
|
23.4
|
1.0
|
CD
|
D:GLU23
|
4.2
|
15.8
|
1.0
|
CG
|
D:GLU23
|
4.3
|
11.8
|
1.0
|
CG
|
D:4BF19
|
4.7
|
14.3
|
1.0
|
OE1
|
D:GLU23
|
4.8
|
17.4
|
1.0
|
|
Bromine binding site 5 out
of 6 in 7qwa
Go back to
Bromine Binding Sites List in 7qwa
Bromine binding site 5 out
of 6 in the Cc-TYPE2-(Ugue)4
 Mono view
 Stereo pair view
|
A full contact list of Bromine with other atoms in the Br binding
site number 5 of Cc-TYPE2-(Ugue)4 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Br19
b:17.8
occ:1.00
|
BR
|
E:4BF19
|
0.0
|
17.8
|
1.0
|
CZ
|
E:4BF19
|
1.9
|
9.9
|
1.0
|
CE1
|
E:4BF19
|
2.8
|
9.0
|
1.0
|
CE2
|
E:4BF19
|
2.8
|
14.6
|
1.0
|
CD2
|
E:4BF19
|
4.1
|
9.6
|
1.0
|
CD1
|
E:4BF19
|
4.1
|
11.1
|
1.0
|
CG
|
E:4BF19
|
4.6
|
11.3
|
1.0
|
|
Bromine binding site 6 out
of 6 in 7qwa
Go back to
Bromine Binding Sites List in 7qwa
Bromine binding site 6 out
of 6 in the Cc-TYPE2-(Ugue)4
 Mono view
 Stereo pair view
|
A full contact list of Bromine with other atoms in the Br binding
site number 6 of Cc-TYPE2-(Ugue)4 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Br19
b:19.0
occ:1.00
|
BR
|
F:4BF19
|
0.0
|
19.0
|
1.0
|
CZ
|
F:4BF19
|
1.9
|
12.6
|
1.0
|
CE1
|
F:4BF19
|
2.8
|
12.8
|
1.0
|
CE2
|
F:4BF19
|
2.8
|
14.3
|
1.0
|
OE1
|
F:GLU23
|
4.1
|
31.6
|
1.0
|
CD1
|
F:4BF19
|
4.1
|
13.1
|
1.0
|
CD2
|
F:4BF19
|
4.1
|
14.0
|
1.0
|
CG
|
F:GLU23
|
4.6
|
19.6
|
1.0
|
CD
|
F:GLU23
|
4.6
|
49.3
|
1.0
|
CB
|
F:GLU23
|
4.7
|
23.7
|
1.0
|
CG
|
F:4BF19
|
4.7
|
14.2
|
1.0
|
|
Reference:
F.J.O.Martin,
F.Zieleniewski,
W.M.Dawson,
D.N.Woolfson.
Cc-TYPE2-(Ugue)4 To Be Published.
Page generated: Thu Jul 11 04:27:04 2024
|