Bromine in PDB 8dq0: Quorum-Sensing Receptor Rhlr Bound to Pqse
Enzymatic activity of Quorum-Sensing Receptor Rhlr Bound to Pqse
All present enzymatic activity of Quorum-Sensing Receptor Rhlr Bound to Pqse:
3.1.2.32;
Bromine Binding Sites:
The binding sites of Bromine atom in the Quorum-Sensing Receptor Rhlr Bound to Pqse
(pdb code 8dq0). This binding sites where shown within
5.0 Angstroms radius around Bromine atom.
In total 2 binding sites of Bromine where determined in the
Quorum-Sensing Receptor Rhlr Bound to Pqse, PDB code: 8dq0:
Jump to Bromine binding site number:
1;
2;
Bromine binding site 1 out
of 2 in 8dq0
Go back to
Bromine Binding Sites List in 8dq0
Bromine binding site 1 out
of 2 in the Quorum-Sensing Receptor Rhlr Bound to Pqse
Mono view
Stereo pair view
|
A full contact list of Bromine with other atoms in the Br binding
site number 1 of Quorum-Sensing Receptor Rhlr Bound to Pqse within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Br301
b:64.9
occ:1.00
|
BR1
|
C:K5G301
|
0.0
|
64.9
|
1.0
|
C02
|
C:K5G301
|
1.9
|
64.9
|
1.0
|
C20
|
C:K5G301
|
2.9
|
64.9
|
1.0
|
C03
|
C:K5G301
|
2.9
|
64.9
|
1.0
|
H4
|
C:K5G301
|
3.0
|
64.9
|
1.0
|
H1
|
C:K5G301
|
3.0
|
64.9
|
1.0
|
HD13
|
C:LEU69
|
3.1
|
64.3
|
1.0
|
HD22
|
C:LEU69
|
3.3
|
64.3
|
1.0
|
HA
|
C:HIS61
|
3.3
|
59.4
|
1.0
|
N
|
C:GLY62
|
3.3
|
54.0
|
1.0
|
H
|
C:GLY62
|
3.4
|
54.0
|
1.0
|
C
|
C:HIS61
|
3.5
|
59.4
|
1.0
|
HG13
|
C:VAL60
|
3.5
|
59.7
|
1.0
|
HA3
|
C:GLY62
|
3.8
|
54.0
|
1.0
|
O
|
C:GLY62
|
3.8
|
54.0
|
1.0
|
CA
|
C:HIS61
|
3.8
|
59.4
|
1.0
|
CA
|
C:GLY62
|
3.9
|
54.0
|
1.0
|
C
|
C:GLY62
|
3.9
|
54.0
|
1.0
|
O
|
C:HIS61
|
3.9
|
59.4
|
1.0
|
HB2
|
C:TYR64
|
3.9
|
56.8
|
1.0
|
CD1
|
C:LEU69
|
3.9
|
64.3
|
1.0
|
HB2
|
C:LEU69
|
3.9
|
64.3
|
1.0
|
HD2
|
C:TYR64
|
4.0
|
56.8
|
1.0
|
H
|
C:TYR64
|
4.1
|
56.8
|
1.0
|
HD11
|
C:LEU69
|
4.1
|
64.3
|
1.0
|
CD2
|
C:LEU69
|
4.1
|
64.3
|
1.0
|
C19
|
C:K5G301
|
4.2
|
64.9
|
1.0
|
C04
|
C:K5G301
|
4.2
|
64.9
|
1.0
|
HG21
|
C:VAL60
|
4.2
|
59.7
|
1.0
|
N
|
C:HIS61
|
4.3
|
59.4
|
1.0
|
O
|
C:VAL60
|
4.3
|
59.7
|
1.0
|
HD21
|
C:LEU69
|
4.4
|
64.3
|
1.0
|
CG1
|
C:VAL60
|
4.4
|
59.7
|
1.0
|
CG
|
C:LEU69
|
4.5
|
64.3
|
1.0
|
C
|
C:VAL60
|
4.5
|
59.7
|
1.0
|
HD12
|
C:LEU69
|
4.7
|
64.3
|
1.0
|
N
|
C:THR63
|
4.7
|
53.9
|
1.0
|
CB
|
C:LEU69
|
4.7
|
64.3
|
1.0
|
C18
|
C:K5G301
|
4.7
|
64.9
|
1.0
|
HB2
|
C:ALA44
|
4.8
|
54.0
|
1.0
|
N
|
C:TYR64
|
4.8
|
56.8
|
1.0
|
HG11
|
C:VAL60
|
4.8
|
59.7
|
1.0
|
HA2
|
C:GLY62
|
4.8
|
54.0
|
1.0
|
H
|
C:HIS61
|
4.8
|
59.4
|
1.0
|
HD23
|
C:LEU69
|
4.8
|
64.3
|
1.0
|
CD2
|
C:TYR64
|
4.9
|
56.8
|
1.0
|
CB
|
C:TYR64
|
4.9
|
56.8
|
1.0
|
HG22
|
C:VAL60
|
4.9
|
59.7
|
1.0
|
CG2
|
C:VAL60
|
4.9
|
59.7
|
1.0
|
HG12
|
C:VAL60
|
4.9
|
59.7
|
1.0
|
|
Bromine binding site 2 out
of 2 in 8dq0
Go back to
Bromine Binding Sites List in 8dq0
Bromine binding site 2 out
of 2 in the Quorum-Sensing Receptor Rhlr Bound to Pqse
Mono view
Stereo pair view
|
A full contact list of Bromine with other atoms in the Br binding
site number 2 of Quorum-Sensing Receptor Rhlr Bound to Pqse within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Br301
b:69.8
occ:1.00
|
BR1
|
D:K5G301
|
0.0
|
69.8
|
1.0
|
C02
|
D:K5G301
|
1.9
|
69.8
|
1.0
|
HG
|
D:LEU69
|
1.9
|
72.2
|
1.0
|
C03
|
D:K5G301
|
2.9
|
69.8
|
1.0
|
C20
|
D:K5G301
|
2.9
|
69.8
|
1.0
|
CG
|
D:LEU69
|
2.9
|
72.2
|
1.0
|
H1
|
D:K5G301
|
3.0
|
69.8
|
1.0
|
H4
|
D:K5G301
|
3.0
|
69.8
|
1.0
|
HD11
|
D:LEU69
|
3.3
|
72.2
|
1.0
|
O
|
D:GLY62
|
3.4
|
63.1
|
1.0
|
HD23
|
D:LEU69
|
3.5
|
72.2
|
1.0
|
CD1
|
D:LEU69
|
3.5
|
72.2
|
1.0
|
HB2
|
D:LEU69
|
3.5
|
72.2
|
1.0
|
HD13
|
D:LEU69
|
3.6
|
72.2
|
1.0
|
CD2
|
D:LEU69
|
3.7
|
72.2
|
1.0
|
H
|
D:GLY62
|
3.7
|
63.1
|
1.0
|
CB
|
D:LEU69
|
3.8
|
72.2
|
1.0
|
HD21
|
D:LEU69
|
3.9
|
72.2
|
1.0
|
N
|
D:GLY62
|
3.9
|
63.1
|
1.0
|
HA
|
D:HIS61
|
4.0
|
65.8
|
1.0
|
C
|
D:GLY62
|
4.0
|
63.1
|
1.0
|
H
|
D:TYR64
|
4.1
|
65.4
|
1.0
|
HG13
|
D:VAL60
|
4.2
|
68.5
|
1.0
|
C19
|
D:K5G301
|
4.2
|
69.8
|
1.0
|
C04
|
D:K5G301
|
4.2
|
69.8
|
1.0
|
HA3
|
D:GLY62
|
4.2
|
63.1
|
1.0
|
CA
|
D:GLY62
|
4.3
|
63.1
|
1.0
|
HB2
|
D:TYR64
|
4.3
|
65.4
|
1.0
|
C
|
D:HIS61
|
4.4
|
65.8
|
1.0
|
HD12
|
D:LEU69
|
4.4
|
72.2
|
1.0
|
HB3
|
D:LEU69
|
4.5
|
72.2
|
1.0
|
HD22
|
D:LEU69
|
4.5
|
72.2
|
1.0
|
HA
|
D:LEU69
|
4.7
|
72.2
|
1.0
|
CA
|
D:HIS61
|
4.7
|
65.8
|
1.0
|
C18
|
D:K5G301
|
4.7
|
69.8
|
1.0
|
HD2
|
D:TYR64
|
4.7
|
65.4
|
1.0
|
CA
|
D:LEU69
|
4.8
|
72.2
|
1.0
|
O
|
D:VAL60
|
4.8
|
68.5
|
1.0
|
N
|
D:TYR64
|
4.9
|
65.4
|
1.0
|
N
|
D:THR63
|
4.9
|
62.7
|
1.0
|
|
Reference:
J.R.Feathers,
E.K.Richael,
K.A.Simanek,
J.C.Fromme,
J.E.Paczkowski.
Structure of the Rhlr-Pqse Complex From Pseudomonas Aeruginosa Reveals Mechanistic Insights Into Quorum-Sensing Gene Regulation. Structure V. 30 1626 2022.
ISSN: ISSN 0969-2126
PubMed: 36379213
DOI: 10.1016/J.STR.2022.10.008
Page generated: Thu Jul 11 05:05:19 2024
|