Atomistry » Bromine » PDB 8e9e-8ii2 » 8g0c
Atomistry »
  Bromine »
    PDB 8e9e-8ii2 »
      8g0c »

Bromine in PDB 8g0c: Cryo-Em Structure of Tbaj-876-Bound Mycobacterium Smegmatis Atp Synthase Rotational State 1 (Backbone Model)

Enzymatic activity of Cryo-Em Structure of Tbaj-876-Bound Mycobacterium Smegmatis Atp Synthase Rotational State 1 (Backbone Model)

All present enzymatic activity of Cryo-Em Structure of Tbaj-876-Bound Mycobacterium Smegmatis Atp Synthase Rotational State 1 (Backbone Model):
7.1.2.2;

Other elements in 8g0c:

The structure of Cryo-Em Structure of Tbaj-876-Bound Mycobacterium Smegmatis Atp Synthase Rotational State 1 (Backbone Model) also contains other interesting chemical elements:

Magnesium (Mg) 4 atoms

Bromine Binding Sites:

The binding sites of Bromine atom in the Cryo-Em Structure of Tbaj-876-Bound Mycobacterium Smegmatis Atp Synthase Rotational State 1 (Backbone Model) (pdb code 8g0c). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 7 binding sites of Bromine where determined in the Cryo-Em Structure of Tbaj-876-Bound Mycobacterium Smegmatis Atp Synthase Rotational State 1 (Backbone Model), PDB code: 8g0c:
Jump to Bromine binding site number: 1; 2; 3; 4; 5; 6; 7;

Bromine binding site 1 out of 7 in 8g0c

Go back to Bromine Binding Sites List in 8g0c
Bromine binding site 1 out of 7 in the Cryo-Em Structure of Tbaj-876-Bound Mycobacterium Smegmatis Atp Synthase Rotational State 1 (Backbone Model)


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Cryo-Em Structure of Tbaj-876-Bound Mycobacterium Smegmatis Atp Synthase Rotational State 1 (Backbone Model) within 5.0Å range:
probe atom residue distance (Å) B Occ
7:Br601

b:31.7
occ:1.00
 BR3 7:YGR601 0.0 31.7 1.0
C38 7:YGR601 1.9 31.7 1.0
C37 7:YGR601 2.9 31.7 1.0
C40 7:YGR601 2.9 31.7 1.0
C33 5:YGR602 3.6 33.8 1.0
CA 6:ALA66 4.0 29.3 1.0
C41 7:YGR601 4.2 31.7 1.0
O32 5:YGR602 4.2 33.8 1.0
C36 7:YGR601 4.2 31.7 1.0
O 6:ALA66 4.7 29.3 1.0
C42 7:YGR601 4.7 31.7 1.0
C 6:ALA66 4.8 29.3 1.0

Bromine binding site 2 out of 7 in 8g0c

Go back to Bromine Binding Sites List in 8g0c
Bromine binding site 2 out of 7 in the Cryo-Em Structure of Tbaj-876-Bound Mycobacterium Smegmatis Atp Synthase Rotational State 1 (Backbone Model)


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Cryo-Em Structure of Tbaj-876-Bound Mycobacterium Smegmatis Atp Synthase Rotational State 1 (Backbone Model) within 5.0Å range:
probe atom residue distance (Å) B Occ
9:Br601

b:33.8
occ:1.00
 BR3 9:YGR601 0.0 33.8 1.0
C38 9:YGR601 1.9 33.8 1.0
C37 9:YGR601 2.9 33.8 1.0
C40 9:YGR601 2.9 33.8 1.0
CA 9:ALA66 3.7 29.7 1.0
C41 9:YGR601 4.2 33.8 1.0
C36 9:YGR601 4.2 33.8 1.0
O a:TRP218 4.5 37.4 1.0
O 9:ALA66 4.6 29.7 1.0
N 9:ALA66 4.6 29.7 1.0
C 9:ALA66 4.7 29.7 1.0
CA a:TRP218 4.7 37.4 1.0
CA a:PHE221 4.7 36.6 1.0
C42 9:YGR601 4.7 33.8 1.0
O 9:GLU65 4.9 29.3 1.0
C a:PHE221 4.9 36.6 1.0
O a:VAL217 5.0 37.6 1.0

Bromine binding site 3 out of 7 in 8g0c

Go back to Bromine Binding Sites List in 8g0c
Bromine binding site 3 out of 7 in the Cryo-Em Structure of Tbaj-876-Bound Mycobacterium Smegmatis Atp Synthase Rotational State 1 (Backbone Model)


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 3 of Cryo-Em Structure of Tbaj-876-Bound Mycobacterium Smegmatis Atp Synthase Rotational State 1 (Backbone Model) within 5.0Å range:
probe atom residue distance (Å) B Occ
2:Br601

b:33.0
occ:1.00
 BR3 2:YGR601 0.0 33.0 1.0
C38 2:YGR601 1.9 33.0 1.0
C37 2:YGR601 2.9 33.0 1.0
C40 2:YGR601 2.9 33.0 1.0
C33 9:YGR601 3.4 33.8 1.0
CA 1:ALA66 3.6 30.1 1.0
O32 9:YGR601 3.9 33.8 1.0
C41 2:YGR601 4.2 33.0 1.0
C36 2:YGR601 4.2 33.0 1.0
N 1:ALA66 4.5 30.1 1.0
C 1:ALA66 4.6 30.1 1.0
O 1:ALA66 4.7 30.1 1.0
C42 2:YGR601 4.7 33.0 1.0
C31 9:YGR601 5.0 33.8 1.0

Bromine binding site 4 out of 7 in 8g0c

Go back to Bromine Binding Sites List in 8g0c
Bromine binding site 4 out of 7 in the Cryo-Em Structure of Tbaj-876-Bound Mycobacterium Smegmatis Atp Synthase Rotational State 1 (Backbone Model)


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 4 of Cryo-Em Structure of Tbaj-876-Bound Mycobacterium Smegmatis Atp Synthase Rotational State 1 (Backbone Model) within 5.0Å range:
probe atom residue distance (Å) B Occ
3:Br601

b:33.0
occ:1.00
 BR3 3:YGR601 0.0 33.0 1.0
C38 3:YGR601 1.9 33.0 1.0
C37 3:YGR601 2.9 33.0 1.0
C40 3:YGR601 2.9 33.0 1.0
C33 2:YGR601 3.5 33.0 1.0
CA 2:ALA66 3.9 29.9 1.0
C41 3:YGR601 4.2 33.0 1.0
C36 3:YGR601 4.2 33.0 1.0
C42 3:YGR601 4.7 33.0 1.0
O32 2:YGR601 4.8 33.0 1.0
C 2:ALA66 4.9 29.9 1.0
O 2:ALA66 4.9 29.9 1.0
N 2:ALA66 4.9 29.9 1.0

Bromine binding site 5 out of 7 in 8g0c

Go back to Bromine Binding Sites List in 8g0c
Bromine binding site 5 out of 7 in the Cryo-Em Structure of Tbaj-876-Bound Mycobacterium Smegmatis Atp Synthase Rotational State 1 (Backbone Model)


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 5 of Cryo-Em Structure of Tbaj-876-Bound Mycobacterium Smegmatis Atp Synthase Rotational State 1 (Backbone Model) within 5.0Å range:
probe atom residue distance (Å) B Occ
3:Br602

b:33.8
occ:1.00
 BR3 3:YGR602 0.0 33.8 1.0
C38 3:YGR602 1.9 33.8 1.0
C37 3:YGR602 2.9 33.8 1.0
C40 3:YGR602 2.9 33.8 1.0
C29 3:YGR601 3.4 33.0 1.0
CA 3:ALA66 3.7 30.4 1.0
C41 3:YGR602 4.2 33.8 1.0
C36 3:YGR602 4.2 33.8 1.0
N 3:ALA66 4.6 30.4 1.0
O28 3:YGR601 4.7 33.0 1.0
C42 3:YGR602 4.7 33.8 1.0
C 3:ALA66 4.8 30.4 1.0
O 3:ALA66 4.9 30.4 1.0

Bromine binding site 6 out of 7 in 8g0c

Go back to Bromine Binding Sites List in 8g0c
Bromine binding site 6 out of 7 in the Cryo-Em Structure of Tbaj-876-Bound Mycobacterium Smegmatis Atp Synthase Rotational State 1 (Backbone Model)


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 6 of Cryo-Em Structure of Tbaj-876-Bound Mycobacterium Smegmatis Atp Synthase Rotational State 1 (Backbone Model) within 5.0Å range:
probe atom residue distance (Å) B Occ
5:Br601

b:33.4
occ:1.00
 BR3 5:YGR601 0.0 33.4 1.0
C38 5:YGR601 1.9 33.4 1.0
C37 5:YGR601 2.9 33.4 1.0
C40 5:YGR601 2.9 33.4 1.0
C33 3:YGR602 3.6 33.8 1.0
CA 4:ALA66 4.1 30.6 1.0
O32 3:YGR602 4.2 33.8 1.0
C41 5:YGR601 4.2 33.4 1.0
C36 5:YGR601 4.2 33.4 1.0
O 4:ALA66 4.7 30.6 1.0
C42 5:YGR601 4.7 33.4 1.0
C 4:ALA66 4.8 30.6 1.0

Bromine binding site 7 out of 7 in 8g0c

Go back to Bromine Binding Sites List in 8g0c
Bromine binding site 7 out of 7 in the Cryo-Em Structure of Tbaj-876-Bound Mycobacterium Smegmatis Atp Synthase Rotational State 1 (Backbone Model)


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 7 of Cryo-Em Structure of Tbaj-876-Bound Mycobacterium Smegmatis Atp Synthase Rotational State 1 (Backbone Model) within 5.0Å range:
probe atom residue distance (Å) B Occ
5:Br602

b:33.8
occ:1.00
 BR3 5:YGR602 0.0 33.8 1.0
C38 5:YGR602 1.9 33.8 1.0
C37 5:YGR602 2.9 33.8 1.0
C40 5:YGR602 2.9 33.8 1.0
CA 5:ALA66 3.7 30.4 1.0
C41 5:YGR602 4.2 33.8 1.0
C36 5:YGR602 4.2 33.8 1.0
O28 5:YGR601 4.2 33.4 1.0
O 5:ALA66 4.6 30.4 1.0
C 5:ALA66 4.6 30.4 1.0
N 5:ALA66 4.7 30.4 1.0
C42 5:YGR602 4.7 33.8 1.0
C29 5:YGR601 5.0 33.4 1.0

Reference:

G.M.Courbon, J.L.Rubinstein. Structural Basis For Inhibition of Mycobacterial Atp Synthase By Squaramides and Second Generation Diarylquinolines To Be Published.
Page generated: Thu Jul 11 05:09:31 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy