Bromine in PDB 8hmt: The Complex of ACK1 with the Inhibitor 2-142
Enzymatic activity of The Complex of ACK1 with the Inhibitor 2-142
All present enzymatic activity of The Complex of ACK1 with the Inhibitor 2-142:
2.7.10.2;
2.7.11.1;
Protein crystallography data
The structure of The Complex of ACK1 with the Inhibitor 2-142, PDB code: 8hmt
was solved by
S.Zhu,
X.Y.Xiaoyun,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
51.71 /
3.17
|
Space group
|
P 1 21 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
51.71,
133.01,
110.667,
90,
90.35,
90
|
R / Rfree (%)
|
20.6 /
26.4
|
Bromine Binding Sites:
The binding sites of Bromine atom in the The Complex of ACK1 with the Inhibitor 2-142
(pdb code 8hmt). This binding sites where shown within
5.0 Angstroms radius around Bromine atom.
In total 4 binding sites of Bromine where determined in the
The Complex of ACK1 with the Inhibitor 2-142, PDB code: 8hmt:
Jump to Bromine binding site number:
1;
2;
3;
4;
Bromine binding site 1 out
of 4 in 8hmt
Go back to
Bromine Binding Sites List in 8hmt
Bromine binding site 1 out
of 4 in the The Complex of ACK1 with the Inhibitor 2-142
Mono view
Stereo pair view
|
A full contact list of Bromine with other atoms in the Br binding
site number 1 of The Complex of ACK1 with the Inhibitor 2-142 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Br401
b:161.0
occ:1.00
|
BR1
|
A:LWX401
|
0.0
|
161.0
|
1.0
|
C31
|
A:LWX401
|
1.9
|
51.4
|
1.0
|
C30
|
A:LWX401
|
2.8
|
48.3
|
1.0
|
C33
|
A:LWX401
|
2.9
|
42.0
|
1.0
|
C29
|
A:LWX401
|
3.1
|
36.5
|
1.0
|
C28
|
A:LWX401
|
3.6
|
39.4
|
1.0
|
CB
|
A:LYS158
|
3.7
|
36.0
|
1.0
|
OG1
|
A:THR205
|
3.8
|
39.3
|
1.0
|
C37
|
A:LWX401
|
3.8
|
33.4
|
1.0
|
O38
|
A:LWX401
|
3.8
|
40.0
|
1.0
|
CG2
|
A:THR205
|
3.8
|
33.2
|
1.0
|
N
|
A:LYS158
|
3.9
|
31.5
|
1.0
|
C34
|
A:LWX401
|
4.1
|
51.2
|
1.0
|
CG1
|
A:VAL140
|
4.2
|
28.0
|
1.0
|
C36
|
A:LWX401
|
4.2
|
31.7
|
1.0
|
CB
|
A:ALA156
|
4.3
|
25.2
|
1.0
|
O
|
A:MET203
|
4.3
|
30.6
|
1.0
|
CA
|
A:LYS158
|
4.4
|
37.5
|
1.0
|
CE
|
A:LYS158
|
4.4
|
56.0
|
1.0
|
C
|
A:VAL157
|
4.4
|
31.2
|
1.0
|
CB
|
A:THR205
|
4.5
|
28.7
|
1.0
|
CG2
|
A:VAL140
|
4.5
|
44.9
|
1.0
|
C
|
A:ALA156
|
4.5
|
29.1
|
1.0
|
N
|
A:VAL157
|
4.5
|
27.7
|
1.0
|
O
|
A:ALA156
|
4.6
|
34.8
|
1.0
|
N21
|
A:LWX401
|
4.6
|
31.5
|
1.0
|
CA
|
A:VAL157
|
4.7
|
23.8
|
1.0
|
C35
|
A:LWX401
|
4.7
|
24.8
|
1.0
|
C19
|
A:LWX401
|
4.8
|
29.0
|
1.0
|
CB
|
A:MET203
|
4.9
|
30.0
|
1.0
|
CG
|
A:LYS158
|
4.9
|
38.4
|
1.0
|
CB
|
A:VAL140
|
4.9
|
26.1
|
1.0
|
|
Bromine binding site 2 out
of 4 in 8hmt
Go back to
Bromine Binding Sites List in 8hmt
Bromine binding site 2 out
of 4 in the The Complex of ACK1 with the Inhibitor 2-142
Mono view
Stereo pair view
|
A full contact list of Bromine with other atoms in the Br binding
site number 2 of The Complex of ACK1 with the Inhibitor 2-142 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Br401
b:125.9
occ:1.00
|
BR1
|
B:LWX401
|
0.0
|
125.9
|
1.0
|
C31
|
B:LWX401
|
1.9
|
50.1
|
1.0
|
C33
|
B:LWX401
|
2.9
|
45.4
|
1.0
|
C30
|
B:LWX401
|
2.9
|
49.8
|
1.0
|
C29
|
B:LWX401
|
3.2
|
40.1
|
1.0
|
CG2
|
B:THR205
|
3.5
|
30.7
|
1.0
|
OG1
|
B:THR205
|
3.6
|
38.1
|
1.0
|
CB
|
B:LYS158
|
3.7
|
29.6
|
1.0
|
C37
|
B:LWX401
|
3.7
|
39.2
|
1.0
|
C28
|
B:LWX401
|
3.9
|
37.5
|
1.0
|
N
|
B:LYS158
|
3.9
|
26.7
|
1.0
|
CB
|
B:ALA156
|
4.1
|
21.6
|
1.0
|
C34
|
B:LWX401
|
4.1
|
32.6
|
1.0
|
O38
|
B:LWX401
|
4.2
|
40.2
|
1.0
|
C
|
B:ALA156
|
4.2
|
30.3
|
1.0
|
C36
|
B:LWX401
|
4.2
|
32.7
|
1.0
|
O
|
B:ALA156
|
4.2
|
39.8
|
1.0
|
CB
|
B:THR205
|
4.2
|
30.7
|
1.0
|
C
|
B:VAL157
|
4.2
|
24.9
|
1.0
|
N
|
B:VAL157
|
4.3
|
28.6
|
1.0
|
CG1
|
B:VAL140
|
4.3
|
30.5
|
1.0
|
CA
|
B:LYS158
|
4.4
|
32.6
|
1.0
|
O
|
B:MET203
|
4.4
|
25.7
|
1.0
|
CG2
|
B:VAL140
|
4.5
|
41.4
|
1.0
|
CA
|
B:VAL157
|
4.5
|
19.3
|
1.0
|
C35
|
B:LWX401
|
4.7
|
13.5
|
1.0
|
CD
|
B:LYS158
|
4.7
|
32.4
|
1.0
|
C19
|
B:LWX401
|
4.7
|
35.0
|
1.0
|
CG
|
B:LYS158
|
4.8
|
29.4
|
1.0
|
N
|
B:THR205
|
4.8
|
33.1
|
1.0
|
CA
|
B:ALA156
|
4.8
|
24.4
|
1.0
|
O
|
B:VAL157
|
4.9
|
26.5
|
1.0
|
N21
|
B:LWX401
|
4.9
|
32.4
|
1.0
|
CB
|
B:MET203
|
5.0
|
31.5
|
1.0
|
CB
|
B:VAL140
|
5.0
|
31.9
|
1.0
|
C
|
B:MET203
|
5.0
|
23.0
|
1.0
|
|
Bromine binding site 3 out
of 4 in 8hmt
Go back to
Bromine Binding Sites List in 8hmt
Bromine binding site 3 out
of 4 in the The Complex of ACK1 with the Inhibitor 2-142
Mono view
Stereo pair view
|
A full contact list of Bromine with other atoms in the Br binding
site number 3 of The Complex of ACK1 with the Inhibitor 2-142 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Br401
b:79.2
occ:1.00
|
BR1
|
C:LWX401
|
0.0
|
79.2
|
1.0
|
C31
|
C:LWX401
|
1.9
|
62.1
|
1.0
|
C30
|
C:LWX401
|
2.8
|
43.3
|
1.0
|
C33
|
C:LWX401
|
2.9
|
45.6
|
1.0
|
C29
|
C:LWX401
|
3.1
|
30.8
|
1.0
|
C37
|
C:LWX401
|
3.5
|
36.5
|
1.0
|
OG1
|
C:THR205
|
3.6
|
37.6
|
1.0
|
CB
|
C:LYS158
|
3.7
|
35.9
|
1.0
|
C28
|
C:LWX401
|
3.8
|
32.0
|
1.0
|
CG2
|
C:THR205
|
3.9
|
30.2
|
1.0
|
N
|
C:LYS158
|
3.9
|
36.0
|
1.0
|
O38
|
C:LWX401
|
4.1
|
48.1
|
1.0
|
CB
|
C:ALA156
|
4.1
|
31.9
|
1.0
|
O
|
C:ALA156
|
4.1
|
29.8
|
1.0
|
C
|
C:ALA156
|
4.1
|
36.5
|
1.0
|
C34
|
C:LWX401
|
4.2
|
40.0
|
1.0
|
C36
|
C:LWX401
|
4.2
|
42.4
|
1.0
|
CG1
|
C:VAL140
|
4.2
|
28.4
|
1.0
|
N
|
C:VAL157
|
4.2
|
35.4
|
1.0
|
C
|
C:VAL157
|
4.3
|
39.8
|
1.0
|
CA
|
C:LYS158
|
4.4
|
35.1
|
1.0
|
CB
|
C:THR205
|
4.4
|
34.5
|
1.0
|
CG2
|
C:VAL140
|
4.4
|
41.2
|
1.0
|
CA
|
C:VAL157
|
4.5
|
29.2
|
1.0
|
C19
|
C:LWX401
|
4.5
|
24.1
|
1.0
|
O
|
C:MET203
|
4.6
|
39.7
|
1.0
|
C35
|
C:LWX401
|
4.7
|
50.0
|
1.0
|
N21
|
C:LWX401
|
4.7
|
31.4
|
1.0
|
CA
|
C:ALA156
|
4.8
|
34.6
|
1.0
|
CG
|
C:LYS158
|
4.9
|
47.5
|
1.0
|
O
|
C:VAL157
|
4.9
|
36.2
|
1.0
|
CB
|
C:VAL140
|
5.0
|
31.6
|
1.0
|
CD
|
C:LYS158
|
5.0
|
54.0
|
1.0
|
|
Bromine binding site 4 out
of 4 in 8hmt
Go back to
Bromine Binding Sites List in 8hmt
Bromine binding site 4 out
of 4 in the The Complex of ACK1 with the Inhibitor 2-142
Mono view
Stereo pair view
|
A full contact list of Bromine with other atoms in the Br binding
site number 4 of The Complex of ACK1 with the Inhibitor 2-142 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Br401
b:83.2
occ:1.00
|
BR1
|
D:LWX401
|
0.0
|
83.2
|
1.0
|
C31
|
D:LWX401
|
1.9
|
67.6
|
1.0
|
C33
|
D:LWX401
|
2.9
|
65.2
|
1.0
|
C30
|
D:LWX401
|
2.9
|
58.9
|
1.0
|
C29
|
D:LWX401
|
3.1
|
46.2
|
1.0
|
O
|
D:ALA156
|
3.7
|
28.8
|
1.0
|
CG1
|
D:VAL140
|
3.7
|
28.6
|
1.0
|
C37
|
D:LWX401
|
3.7
|
36.2
|
1.0
|
C28
|
D:LWX401
|
3.7
|
36.9
|
1.0
|
OG1
|
D:THR205
|
3.8
|
39.0
|
1.0
|
CG
|
D:LYS158
|
3.8
|
32.8
|
1.0
|
CG2
|
D:THR205
|
3.9
|
27.9
|
1.0
|
O38
|
D:LWX401
|
3.9
|
40.3
|
1.0
|
CB
|
D:LYS158
|
3.9
|
38.2
|
1.0
|
N
|
D:LYS158
|
4.0
|
32.4
|
1.0
|
C
|
D:ALA156
|
4.1
|
31.4
|
1.0
|
C34
|
D:LWX401
|
4.1
|
66.7
|
1.0
|
C
|
D:VAL157
|
4.2
|
34.7
|
1.0
|
C36
|
D:LWX401
|
4.2
|
52.9
|
1.0
|
CB
|
D:ALA156
|
4.3
|
37.4
|
1.0
|
CA
|
D:LYS158
|
4.4
|
39.7
|
1.0
|
O
|
D:MET203
|
4.4
|
39.9
|
1.0
|
CB
|
D:THR205
|
4.5
|
30.8
|
1.0
|
N
|
D:VAL157
|
4.5
|
28.6
|
1.0
|
CA
|
D:VAL157
|
4.5
|
31.5
|
1.0
|
N21
|
D:LWX401
|
4.6
|
25.1
|
1.0
|
C19
|
D:LWX401
|
4.7
|
33.6
|
1.0
|
O
|
D:VAL157
|
4.7
|
31.1
|
1.0
|
C35
|
D:LWX401
|
4.7
|
60.5
|
1.0
|
CB
|
D:VAL140
|
4.9
|
28.9
|
1.0
|
CA
|
D:ALA156
|
4.9
|
32.3
|
1.0
|
CE
|
D:LYS158
|
4.9
|
65.8
|
1.0
|
CG2
|
D:VAL140
|
4.9
|
41.3
|
1.0
|
CD
|
D:LYS158
|
5.0
|
38.7
|
1.0
|
|
Reference:
S.Zhu,
X.Y.Xiaoyun.
The Complex of ACK1 with the Inhibitor 2-142 To Be Published.
Page generated: Thu Jul 11 05:15:14 2024
|