Atomistry » Bromine » PDB 8hgk-9est » 8ji5
Atomistry »
  Bromine »
    PDB 8hgk-9est »
      8ji5 »

Bromine in PDB 8ji5: Crystal Structure of Aetd in Complex with 5-Bromo-L-Tryptophan and Two FE2+

Protein crystallography data

The structure of Crystal Structure of Aetd in Complex with 5-Bromo-L-Tryptophan and Two FE2+, PDB code: 8ji5 was solved by H.Li, L.Dai, H.B.Zheng, C.-C.Chen, R.-T.Guo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 22.77 / 2.01
Space group P 41
Cell size a, b, c (Å), α, β, γ (°) 65.633, 65.633, 117.313, 90, 90, 90
R / Rfree (%) 20.6 / 27.3

Other elements in 8ji5:

The structure of Crystal Structure of Aetd in Complex with 5-Bromo-L-Tryptophan and Two FE2+ also contains other interesting chemical elements:

Nickel (Ni) 1 atom
Iron (Fe) 4 atoms

Bromine Binding Sites:

The binding sites of Bromine atom in the Crystal Structure of Aetd in Complex with 5-Bromo-L-Tryptophan and Two FE2+ (pdb code 8ji5). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 2 binding sites of Bromine where determined in the Crystal Structure of Aetd in Complex with 5-Bromo-L-Tryptophan and Two FE2+, PDB code: 8ji5:
Jump to Bromine binding site number: 1; 2;

Bromine binding site 1 out of 2 in 8ji5

Go back to Bromine Binding Sites List in 8ji5
Bromine binding site 1 out of 2 in the Crystal Structure of Aetd in Complex with 5-Bromo-L-Tryptophan and Two FE2+


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Crystal Structure of Aetd in Complex with 5-Bromo-L-Tryptophan and Two FE2+ within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br303

b:31.4
occ:1.00
BR1 A:64X303 0.0 31.4 1.0
CZ3 A:64X303 1.8 22.3 1.0
CH2 A:64X303 2.8 20.6 1.0
CE3 A:64X303 2.8 20.4 1.0
CD1 A:PHE44 4.0 18.8 1.0
CZ2 A:64X303 4.0 19.7 1.0
CD2 A:64X303 4.1 19.7 1.0
CE1 A:PHE44 4.2 18.1 1.0
CD1 A:ILE146 4.2 21.8 1.0
CG A:PHE44 4.3 17.0 1.0
CD2 A:LEU217 4.3 19.3 1.0
CD1 A:LEU217 4.4 18.9 1.0
CZ A:PHE221 4.4 18.6 1.0
CE2 A:PHE221 4.4 19.8 1.0
CG2 A:ILE41 4.5 16.6 1.0
CE2 A:64X303 4.5 18.7 1.0
CG2 A:ILE146 4.5 20.4 1.0
CE2 A:PHE147 4.6 22.8 1.0
CZ A:PHE44 4.6 16.7 1.0
CG1 A:ILE41 4.6 16.9 1.0
CD2 A:PHE44 4.7 16.5 1.0
CB A:PHE44 4.8 17.8 1.0
CE2 A:PHE44 4.9 17.2 1.0
CZ A:PHE147 4.9 21.2 1.0
CG A:LEU217 5.0 18.7 1.0

Bromine binding site 2 out of 2 in 8ji5

Go back to Bromine Binding Sites List in 8ji5
Bromine binding site 2 out of 2 in the Crystal Structure of Aetd in Complex with 5-Bromo-L-Tryptophan and Two FE2+


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Crystal Structure of Aetd in Complex with 5-Bromo-L-Tryptophan and Two FE2+ within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Br303

b:29.0
occ:1.00
BR1 B:64X303 0.0 29.0 1.0
CZ3 B:64X303 1.9 21.7 1.0
CE3 B:64X303 2.9 20.9 1.0
CH2 B:64X303 2.9 21.4 1.0
CD1 B:PHE44 4.0 19.6 1.0
CD1 B:LEU217 4.1 20.5 1.0
CZ2 B:64X303 4.1 20.9 1.0
CD2 B:64X303 4.1 19.7 1.0
CE1 B:PHE44 4.2 18.8 1.0
CG B:PHE44 4.3 18.2 1.0
CE2 B:PHE221 4.3 18.9 1.0
CD1 B:ILE146 4.3 17.7 1.0
CZ B:PHE221 4.4 18.5 1.0
CD2 B:LEU217 4.4 19.8 1.0
CG1 B:ILE41 4.5 13.7 1.0
CG2 B:ILE41 4.6 12.2 1.0
CE2 B:64X303 4.6 19.4 1.0
CZ B:PHE44 4.7 19.2 1.0
CG2 B:ILE146 4.7 15.2 1.0
CE2 B:PHE147 4.7 16.3 1.0
CD2 B:PHE44 4.7 19.8 1.0
CB B:PHE44 4.8 17.9 1.0
CG B:LEU217 4.9 18.3 1.0
CZ B:PHE147 4.9 15.1 1.0
CE2 B:PHE44 4.9 18.5 1.0

Reference:

H.Li, L.Dai, H.B.Zheng, C.-C.Chen, R.-T.Guo. Crystal Structure of Aetd in Complex with 5-Bromo-L-Tryptophan and Two FE2+ To Be Published.
Page generated: Thu Dec 28 01:04:54 2023

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy