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Bromine in PDB 8vtm: Crystal Structure of R. Sphaeroides Photosynthetic Reaction Center Variant Y(M210)2-Bromophenylalanine

Protein crystallography data

The structure of Crystal Structure of R. Sphaeroides Photosynthetic Reaction Center Variant Y(M210)2-Bromophenylalanine, PDB code: 8vtm was solved by K.Tran, I.Mathews, S.G.Boxer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.99 / 3.51
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 141.79, 141.79, 187.71, 90, 90, 120
R / Rfree (%) 22 / 26.1

Other elements in 8vtm:

The structure of Crystal Structure of R. Sphaeroides Photosynthetic Reaction Center Variant Y(M210)2-Bromophenylalanine also contains other interesting chemical elements:

Chlorine (Cl) 1 atom
Iron (Fe) 1 atom
Magnesium (Mg) 4 atoms

Bromine Binding Sites:

The binding sites of Bromine atom in the Crystal Structure of R. Sphaeroides Photosynthetic Reaction Center Variant Y(M210)2-Bromophenylalanine (pdb code 8vtm). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Crystal Structure of R. Sphaeroides Photosynthetic Reaction Center Variant Y(M210)2-Bromophenylalanine, PDB code: 8vtm:

Bromine binding site 1 out of 1 in 8vtm

Go back to Bromine Binding Sites List in 8vtm
Bromine binding site 1 out of 1 in the Crystal Structure of R. Sphaeroides Photosynthetic Reaction Center Variant Y(M210)2-Bromophenylalanine


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Crystal Structure of R. Sphaeroides Photosynthetic Reaction Center Variant Y(M210)2-Bromophenylalanine within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Br210

b:90.5
occ:1.00
BR M:6DU210 0.0 90.5 1.0
CD1 M:6DU210 1.9 74.1 1.0
CE1 M:6DU210 2.8 79.0 1.0
CG M:6DU210 2.9 67.5 1.0
O2A L:BCL301 3.1 57.3 1.0
CB M:6DU210 3.2 65.2 1.0
CBB M:BPH408 3.5 53.3 1.0
CG2 M:ILE206 3.5 72.2 1.0
CBA L:BCL301 3.6 55.9 1.0
CGA L:BCL301 3.6 59.9 1.0
C1 L:BCL301 4.0 57.5 1.0
OBB M:BPH408 4.1 59.2 1.0
CZ M:6DU210 4.1 80.8 1.0
CAB M:BPH408 4.1 51.5 1.0
O M:ILE206 4.1 65.0 1.0
CD2 M:6DU210 4.1 66.9 1.0
CA M:ALA207 4.3 56.3 1.0
C M:ILE206 4.3 57.1 1.0
N M:ALA207 4.4 53.5 1.0
CAA L:BCL301 4.4 60.4 1.0
CHA L:BCL301 4.5 59.6 1.0
O1A L:BCL301 4.6 70.1 1.0
C4D L:BCL301 4.6 58.7 1.0
CE2 M:6DU210 4.6 75.3 1.0
CA M:6DU210 4.6 58.9 1.0
C1A L:BCL301 4.7 60.5 1.0
CB M:ILE206 4.7 54.6 1.0
ND L:BCL301 4.7 55.5 1.0
NA L:BCL301 4.9 56.4 1.0
N M:6DU210 5.0 59.8 1.0

Reference:

K.Tran, I.Mathews, S.G.Boxer. Crystal Structure of R. Sphaeroides Photosynthetic Reaction Center Variant Y(M210)2-Bromophenylalanine To Be Published.
Page generated: Thu Jul 11 05:39:57 2024

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