Bromine in PDB 9bj5: Crystal Structure of the Hepn Family Member Abiv (P212121 Space Group)

The structure of Crystal Structure of the Hepn Family Member Abiv (P212121 Space Group), PDB code: 9bj5 was solved by X.Zhu, S.Moineau, R.Shi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	42.31 / 2.55
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	73.693, 79.168, 136.137, 90, 90, 90
R / Rfree (%)	21.9 / 26.7

The structure of Crystal Structure of the Hepn Family Member Abiv (P212121 Space Group) also contains other interesting chemical elements:

Sodium

(Na)

1 atom

The binding sites of Bromine atom in the Crystal Structure of the Hepn Family Member Abiv (P212121 Space Group) (pdb code 9bj5). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 3 binding sites of Bromine where determined in the Crystal Structure of the Hepn Family Member Abiv (P212121 Space Group), PDB code: 9bj5:
Jump to Bromine binding site number: 1; 2; 3;

Bromine binding site 1 out of 3 in the Crystal Structure of the Hepn Family Member Abiv (P212121 Space Group)


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Crystal Structure of the Hepn Family Member Abiv (P212121 Space Group) within 5.0Å range: probe atom residue distance (Å) B Occ A:Br302 b:43.5 occ:0.30 CB A:HIS181 3.7 59.0 1.0 CG A:HIS181 4.0 63.5 1.0 ND1 A:HIS181 4.4 67.9 1.0 O A:HOH401 4.5 58.0 1.0 CD2 A:HIS181 4.7 64.8 1.0

Bromine binding site 2 out of 3 in the Crystal Structure of the Hepn Family Member Abiv (P212121 Space Group)


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Crystal Structure of the Hepn Family Member Abiv (P212121 Space Group) within 5.0Å range: probe atom residue distance (Å) B Occ B:Br301 b:50.6 occ:0.50 N B:HIS181 3.5 86.3 1.0 N B:HIS182 3.5 83.4 1.0 ND2 B:ASN32 3.6 60.8 1.0 CB B:THR180 3.7 72.4 1.0 CB B:HIS181 3.9 119.9 1.0 CB B:HIS182 4.0 82.0 1.0 CA B:HIS181 4.1 98.4 1.0 CG2 B:THR180 4.3 70.0 1.0 C B:HIS181 4.3 91.2 1.0 C B:THR180 4.3 80.7 1.0 CA B:HIS182 4.4 79.5 1.0 CA B:THR180 4.4 76.2 1.0 OG1 B:THR180 4.5 73.4 1.0 CG B:ASN32 4.6 59.0 1.0 OD1 B:ASN32 4.8 65.0 1.0 OG1 B:THR28 5.0 81.0 1.0

Bromine binding site 3 out of 3 in the Crystal Structure of the Hepn Family Member Abiv (P212121 Space Group)


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 3 of Crystal Structure of the Hepn Family Member Abiv (P212121 Space Group) within 5.0Å range: probe atom residue distance (Å) B Occ D:Br301 b:52.8 occ:0.50 N D:HIS182 3.3 78.4 1.0 N D:HIS181 3.4 81.1 1.0 CB D:HIS181 3.6 85.3 1.0 ND2 D:ASN32 3.6 57.4 1.0 CA D:HIS181 3.9 83.0 1.0 CB D:HIS182 3.9 80.2 1.0 CB D:THR180 4.0 77.7 1.0 C D:HIS181 4.0 79.5 1.0 CA D:HIS182 4.2 78.3 1.0 C D:THR180 4.3 80.6 1.0 OG1 D:THR180 4.5 78.5 1.0 CA D:THR180 4.6 81.2 1.0 CG D:HIS181 4.7 94.4 1.0 CG D:ASN32 4.7 58.7 1.0 OD1 D:ASN32 4.8 63.5 1.0 CG2 D:THR180 4.8 76.1 1.0 CD2 D:HIS181 4.9 96.2 1.0 OG1 D:THR28 5.0 73.5 1.0

X.Zhu, C.Morency, M.-E.Picard, C.Mosterd, J.A.Mcalister, A.Perrault-Jolicoeur, J.Geddes-Mcalister, R.Shi, S.Moineau. Hepn-Abiv Is An Rnase in the Abiv Antiphage System To Be Published.