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Bromine in PDB 9g4p: Crystal Structure of the Skipping-Rope Rna Motif.

Protein crystallography data

The structure of Crystal Structure of the Skipping-Rope Rna Motif., PDB code: 9g4p was solved by L.Huang, D.M.J.Lilley, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.83 / 2.90
Space group P 61
Cell size a, b, c (Å), α, β, γ (°) 113.478, 113.478, 59.286, 90, 90, 120
R / Rfree (%) 19.3 / 23.2

Other elements in 9g4p:

The structure of Crystal Structure of the Skipping-Rope Rna Motif. also contains other interesting chemical elements:

Magnesium (Mg) 4 atoms

Bromine Binding Sites:

The binding sites of Bromine atom in the Crystal Structure of the Skipping-Rope Rna Motif. (pdb code 9g4p). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Crystal Structure of the Skipping-Rope Rna Motif., PDB code: 9g4p:

Bromine binding site 1 out of 1 in 9g4p

Go back to Bromine Binding Sites List in 9g4p
Bromine binding site 1 out of 1 in the Crystal Structure of the Skipping-Rope Rna Motif.


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Crystal Structure of the Skipping-Rope Rna Motif. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br32

b:151.1
occ:1.00
BR A:CBV32 0.0 151.1 1.0
C5 A:CBV32 1.9 133.3 1.0
C6 A:CBV32 2.9 121.8 1.0
C4 A:CBV32 3.0 119.7 1.0
N4 A:CBV32 3.2 115.3 1.0
C4 A:C31 3.5 92.5 1.0
N3 A:C31 3.5 92.0 1.0
C5 A:C31 3.6 94.0 1.0
C2 A:C31 3.8 96.3 1.0
C6 A:C31 3.8 95.1 1.0
O2P A:CBV32 3.9 117.9 1.0
N1 A:C31 3.9 94.6 1.0
N4 A:C31 4.0 92.0 1.0
N1 A:CBV32 4.1 111.3 1.0
N3 A:CBV32 4.2 115.5 1.0
O2 A:C31 4.4 111.9 1.0
C2' A:C31 4.4 108.2 1.0
C3' A:C31 4.5 110.5 1.0
O5' A:CBV32 4.6 120.0 1.0
C2 A:CBV32 4.6 115.5 1.0
C1' A:C31 4.8 96.4 1.0
P A:CBV32 4.8 122.1 1.0

Reference:

L.Huang, D.M.J.Lilley. Structural Basis For Trna-Mimicking By Skipping-Rope Rna Motif To Be Published.
Page generated: Mon Aug 4 17:38:35 2025

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