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Bromine in PDB 2hit: Reaction Centre From Rhodobacter Sphaeroides Strain R-26.1 Complexed with Dibrominated Phosphatidylethanolamine

Protein crystallography data

The structure of Reaction Centre From Rhodobacter Sphaeroides Strain R-26.1 Complexed with Dibrominated Phosphatidylethanolamine, PDB code: 2hit was solved by A.W.Roszak, A.T.Gardiner, N.W.Isaacs, R.J.Cogdell, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.01 / 2.75
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 139.289, 139.289, 183.839, 90.00, 90.00, 120.00
R / Rfree (%) 18.2 / 22.2

Other elements in 2hit:

The structure of Reaction Centre From Rhodobacter Sphaeroides Strain R-26.1 Complexed with Dibrominated Phosphatidylethanolamine also contains other interesting chemical elements:

Magnesium (Mg) 4 atoms
Potassium (K) 1 atom
Iron (Fe) 1 atom
Chlorine (Cl) 3 atoms

Bromine Binding Sites:

The binding sites of Bromine atom in the Reaction Centre From Rhodobacter Sphaeroides Strain R-26.1 Complexed with Dibrominated Phosphatidylethanolamine (pdb code 2hit). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 2 binding sites of Bromine where determined in the Reaction Centre From Rhodobacter Sphaeroides Strain R-26.1 Complexed with Dibrominated Phosphatidylethanolamine, PDB code: 2hit:
Jump to Bromine binding site number: 1; 2;

Bromine binding site 1 out of 2 in 2hit

Go back to Bromine Binding Sites List in 2hit
Bromine binding site 1 out of 2 in the Reaction Centre From Rhodobacter Sphaeroides Strain R-26.1 Complexed with Dibrominated Phosphatidylethanolamine


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Reaction Centre From Rhodobacter Sphaeroides Strain R-26.1 Complexed with Dibrominated Phosphatidylethanolamine within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Br802

b:77.1
occ:0.20
BR2 M:PEW802 0.0 77.1 0.2
C40 M:PEW802 1.9 76.0 0.5
C39 M:PEW802 2.7 75.8 0.5
C38 M:PEW802 2.7 73.8 0.5
C41 M:PEW802 2.8 75.9 0.5
CD2 M:LEU47 3.2 72.5 1.0
BR1 M:PEW802 3.5 84.0 0.2
CD1 M:LEU47 3.9 74.3 1.0
CG M:LEU47 4.0 73.9 1.0
C42 M:PEW802 4.2 74.4 0.5
CB M:LEU47 4.3 72.2 1.0
C37 M:PEW802 4.3 71.9 0.5
O L:GLY221 4.5 71.7 1.0
CB L:TYR222 4.6 69.0 1.0
C43 M:PEW802 4.8 72.7 0.5
C36 M:PEW802 4.9 71.5 0.5

Bromine binding site 2 out of 2 in 2hit

Go back to Bromine Binding Sites List in 2hit
Bromine binding site 2 out of 2 in the Reaction Centre From Rhodobacter Sphaeroides Strain R-26.1 Complexed with Dibrominated Phosphatidylethanolamine


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Reaction Centre From Rhodobacter Sphaeroides Strain R-26.1 Complexed with Dibrominated Phosphatidylethanolamine within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Br802

b:84.0
occ:0.20
BR1 M:PEW802 0.0 84.0 0.2
C39 M:PEW802 1.9 75.8 0.5
C40 M:PEW802 2.7 76.0 0.5
C41 M:PEW802 2.8 75.9 0.5
C38 M:PEW802 2.8 73.8 0.5
C19 M:BCL311 3.4 0.0 1.0
C37 M:PEW802 3.5 71.9 0.5
BR2 M:PEW802 3.5 77.1 0.2
C19 M:PEW802 3.7 67.8 0.5
C42 M:PEW802 3.8 74.4 0.5
C17 M:BCL311 3.8 0.6 1.0
C15 M:BCL311 4.0 0.2 1.0
C21 M:PEW802 4.0 62.9 0.5
C18 M:BCL311 4.2 0.6 1.0
C16 M:BCL311 4.2 0.8 1.0
O L:VAL220 4.3 72.2 1.0
C20 M:PEW802 4.5 66.1 0.5
C36 M:PEW802 4.8 71.5 0.5
C17 M:PEW802 4.9 70.8 0.5
C18 M:PEW802 4.9 69.3 0.5
C22 M:PEW802 4.9 62.9 0.5

Reference:

A.W.Roszak, A.T.Gardiner, N.W.Isaacs, R.J.Cogdell. Brominated Lipids Identify Lipid Binding Sites on the Surface of the Reaction Center From Rhodobacter Sphaeroides. Biochemistry V. 46 2909 2007.
ISSN: ISSN 0006-2960
PubMed: 17315985
DOI: 10.1021/BI062154I
Page generated: Mon Jul 7 04:19:38 2025

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