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Bromine in PDB 2jsk: Monomeric Human Telomere Dna Tetraplex with 3+1 Strand Fold Topology, Two Edgewise Loops and Double-Chain Reversal Loop, 16 G Form 1, uc(Nmr), 10 Structures

Bromine Binding Sites:

The binding sites of Bromine atom in the Monomeric Human Telomere Dna Tetraplex with 3+1 Strand Fold Topology, Two Edgewise Loops and Double-Chain Reversal Loop, 16 G Form 1, uc(Nmr), 10 Structures (pdb code 2jsk). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Monomeric Human Telomere Dna Tetraplex with 3+1 Strand Fold Topology, Two Edgewise Loops and Double-Chain Reversal Loop, 16 G Form 1, uc(Nmr), 10 Structures, PDB code: 2jsk:

Bromine binding site 1 out of 1 in 2jsk

Go back to Bromine Binding Sites List in 2jsk
Bromine binding site 1 out of 1 in the Monomeric Human Telomere Dna Tetraplex with 3+1 Strand Fold Topology, Two Edgewise Loops and Double-Chain Reversal Loop, 16 G Form 1, uc(Nmr), 10 Structures


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Monomeric Human Telomere Dna Tetraplex with 3+1 Strand Fold Topology, Two Edgewise Loops and Double-Chain Reversal Loop, 16 G Form 1, uc(Nmr), 10 Structures within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br16

b:0.0
occ:1.00
BR A:BGM16 0.0 0.0 1.0
C8 A:BGM16 1.9 0.0 1.0
H1' A:BGM16 2.8 0.0 1.0
N7 A:BGM16 2.8 0.0 1.0
N9 A:BGM16 2.9 0.0 1.0
O4' A:DG17 3.2 0.0 1.0
C1' A:BGM16 3.3 0.0 1.0
H21 A:DG10 3.7 0.0 1.0
H22 A:DG10 3.9 0.0 1.0
H1' A:DG17 4.0 0.0 1.0
C5 A:BGM16 4.0 0.0 1.0
C1' A:DG17 4.0 0.0 1.0
C4 A:BGM16 4.0 0.0 1.0
N9 A:DG17 4.1 0.0 1.0
O4' A:BGM16 4.1 0.0 1.0
H4' A:DG17 4.2 0.0 1.0
H5' A:DG17 4.2 0.0 1.0
C4' A:DG17 4.2 0.0 1.0
N2 A:DG10 4.2 0.0 1.0
H22 A:DG11 4.2 0.0 1.0
C4 A:DG17 4.3 0.0 1.0
N3 A:DG17 4.3 0.0 1.0
C2' A:BGM16 4.6 0.0 1.0
H2'' A:BGM16 4.6 0.0 1.0
C8 A:DG17 4.8 0.0 1.0
C5' A:DG17 4.8 0.0 1.0
N2 A:DG11 4.8 0.0 1.0
C5 A:DG17 5.0 0.0 1.0

Reference:

A.T.Phan, V.Kuryavyi, K.N.Luu, D.J.Patel. Structure of Two Intramolecular G-Quadruplexes Formed By Natural Human Telomere Sequences in K+ Solution. Nucleic Acids Res. V. 35 6517 2007.
ISSN: ISSN 0305-1048
PubMed: 17895279
DOI: 10.1093/NAR/GKM706
Page generated: Wed Jul 10 18:17:45 2024

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