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Bromine in PDB 2kf7: Structure of A Two-G-Tetrad Basket-Type Intramolecular G- Quadruplex Formed By Human Telomeric Repeats in K+ Solution (with G7-to-Brg Substitution)

Bromine Binding Sites:

The binding sites of Bromine atom in the Structure of A Two-G-Tetrad Basket-Type Intramolecular G- Quadruplex Formed By Human Telomeric Repeats in K+ Solution (with G7-to-Brg Substitution) (pdb code 2kf7). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Structure of A Two-G-Tetrad Basket-Type Intramolecular G- Quadruplex Formed By Human Telomeric Repeats in K+ Solution (with G7-to-Brg Substitution), PDB code: 2kf7:

Bromine binding site 1 out of 1 in 2kf7

Go back to Bromine Binding Sites List in 2kf7
Bromine binding site 1 out of 1 in the Structure of A Two-G-Tetrad Basket-Type Intramolecular G- Quadruplex Formed By Human Telomeric Repeats in K+ Solution (with G7-to-Brg Substitution)


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Structure of A Two-G-Tetrad Basket-Type Intramolecular G- Quadruplex Formed By Human Telomeric Repeats in K+ Solution (with G7-to-Brg Substitution) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br7

b:0.6
occ:1.00
BR A:BGM7 0.0 0.6 1.0
C8 A:BGM7 1.9 0.5 1.0
N7 A:BGM7 2.8 0.4 1.0
H1' A:BGM7 2.8 0.6 1.0
N9 A:BGM7 2.9 0.4 1.0
O4' A:DG8 3.2 0.6 1.0
C1' A:BGM7 3.4 0.5 1.0
H2 A:DA6 3.6 0.9 1.0
C2 A:DA6 3.6 0.8 1.0
H1' A:DG8 3.7 0.5 1.0
N1 A:DA6 3.8 0.7 1.0
H4' A:DG8 3.9 0.7 1.0
H22 A:DG2 3.9 0.6 1.0
H21 A:DG2 3.9 0.6 1.0
C1' A:DG8 3.9 0.5 1.0
C5 A:BGM7 4.0 0.4 1.0
C4 A:BGM7 4.0 0.4 1.0
N3 A:DG8 4.0 0.4 1.0
N3 A:DA6 4.1 0.7 1.0
O4 A:DT4 4.1 1.4 1.0
C4' A:DG8 4.2 0.6 1.0
N9 A:DG8 4.2 0.5 1.0
C4 A:DT4 4.2 1.2 1.0
C4 A:DG8 4.2 0.4 1.0
N2 A:DG2 4.3 0.5 1.0
O4' A:BGM7 4.4 0.6 1.0
H2'' A:BGM7 4.4 0.7 1.0
C6 A:DA6 4.4 0.6 1.0
C2' A:BGM7 4.5 0.5 1.0
H5' A:DG8 4.5 0.8 1.0
H72 A:DT4 4.5 1.3 1.0
H71 A:DT4 4.5 1.4 1.0
C5 A:DT4 4.6 1.1 1.0
C4 A:DA6 4.7 0.6 1.0
N3 A:DT4 4.7 1.2 1.0
C2 A:DG8 4.8 0.5 1.0
C7 A:DT4 4.8 1.2 1.0
C5 A:DA6 4.9 0.6 1.0
H3 A:DT4 4.9 1.4 1.0
C5' A:DG8 4.9 0.7 1.0

Reference:

K.W.Lim, S.Amrane, S.Bouaziz, W.Xu, Y.Mu, D.J.Patel, K.N.Luu, A.T.Phan. Structure of the Human Telomere in K+ Solution: A Stable Basket-Type G-Quadruplex with Only Two G-Tetrad Layers J.Am.Chem.Soc. V. 131 4301 2009.
ISSN: ISSN 0002-7863
PubMed: 19271707
DOI: 10.1021/JA807503G
Page generated: Wed Jul 10 18:17:45 2024

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