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Bromine in PDB 2pmo: Crystal Structure of PFPK7 in Complex with Hymenialdisine

Protein crystallography data

The structure of Crystal Structure of PFPK7 in Complex with Hymenialdisine, PDB code: 2pmo was solved by A.Merckx, A.Echalier, M.Noble, J.Endicott, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 69.34 / 2.90
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 73.061, 82.473, 138.717, 90.00, 90.00, 90.00
R / Rfree (%) 23 / 31.6

Bromine Binding Sites:

The binding sites of Bromine atom in the Crystal Structure of PFPK7 in Complex with Hymenialdisine (pdb code 2pmo). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Crystal Structure of PFPK7 in Complex with Hymenialdisine, PDB code: 2pmo:

Bromine binding site 1 out of 1 in 2pmo

Go back to Bromine Binding Sites List in 2pmo
Bromine binding site 1 out of 1 in the Crystal Structure of PFPK7 in Complex with Hymenialdisine


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Crystal Structure of PFPK7 in Complex with Hymenialdisine within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Br400

b:60.8
occ:1.00
BR1 X:HMD400 0.0 60.8 1.0
C1 X:HMD400 2.0 57.8 1.0
N1 X:HMD400 2.9 57.9 1.0
C2 X:HMD400 2.9 57.0 1.0
CB X:ASP123 3.8 31.4 1.0
OD2 X:ASP123 3.8 34.0 1.0
CG X:ASP123 4.0 32.4 1.0
C4 X:HMD400 4.0 57.3 1.0
C3 X:HMD400 4.1 57.0 1.0
CA X:ASP123 4.1 31.3 1.0
CB X:LEU34 4.4 37.0 1.0
CB X:ASN35 4.5 38.6 1.0
N X:SER124 4.7 31.1 1.0
C X:ASP123 4.7 31.2 1.0
O X:LEU34 4.8 37.9 1.0
C X:LEU34 4.9 37.7 1.0
OD1 X:ASP123 5.0 33.4 1.0
CD2 X:LEU179 5.0 26.0 1.0

Reference:

A.Merckx, A.Echalier, K.Langford, A.Sicard, G.Langsley, J.Joore, C.Doerig, M.Noble, J.Endicott. Structures of P. Falciparum Protein Kinase 7 Identify An Activation Motif and Leads For Inhibitor Design. Structure V. 16 228 2008.
ISSN: ISSN 0969-2126
PubMed: 18275814
DOI: 10.1016/J.STR.2007.11.014
Page generated: Wed Jul 10 18:21:09 2024

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