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Bromine in PDB 2wq1: GCN4 Leucine Zipper Mutant with Three Ixxntxx Motifs Coordinating Bromide

Protein crystallography data

The structure of GCN4 Leucine Zipper Mutant with Three Ixxntxx Motifs Coordinating Bromide, PDB code: 2wq1 was solved by M.D.Hartmann, B.Hernandez Alvarez, A.N.Lupas, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 16.33 / 1.08
Space group I 21 3
Cell size a, b, c (Å), α, β, γ (°) 56.580, 56.580, 56.580, 90.00, 90.00, 90.00
R / Rfree (%) 12.741 / 16.748

Bromine Binding Sites:

The binding sites of Bromine atom in the GCN4 Leucine Zipper Mutant with Three Ixxntxx Motifs Coordinating Bromide (pdb code 2wq1). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 3 binding sites of Bromine where determined in the GCN4 Leucine Zipper Mutant with Three Ixxntxx Motifs Coordinating Bromide, PDB code: 2wq1:
Jump to Bromine binding site number: 1; 2; 3;

Bromine binding site 1 out of 3 in 2wq1

Go back to Bromine Binding Sites List in 2wq1
Bromine binding site 1 out of 3 in the GCN4 Leucine Zipper Mutant with Three Ixxntxx Motifs Coordinating Bromide


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of GCN4 Leucine Zipper Mutant with Three Ixxntxx Motifs Coordinating Bromide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br1033

b:15.8
occ:0.33
ND2 A:ASN12 3.3 12.9 1.0
CB A:ASN12 4.0 11.2 1.0
CA A:ILE9 4.1 10.9 0.5
CG A:ASN12 4.1 11.5 1.0
CA A:ILE9 4.2 12.8 0.5
CG1 A:ILE9 4.2 12.5 1.0
CG2 A:ILE9 4.2 14.8 1.0
CB A:ILE9 4.4 11.9 1.0
O A:ILE9 4.6 12.9 0.5
O A:ILE9 4.6 10.9 0.5
C A:ILE9 4.9 12.6 0.5
C A:ILE9 4.9 10.1 0.5

Bromine binding site 2 out of 3 in 2wq1

Go back to Bromine Binding Sites List in 2wq1
Bromine binding site 2 out of 3 in the GCN4 Leucine Zipper Mutant with Three Ixxntxx Motifs Coordinating Bromide


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of GCN4 Leucine Zipper Mutant with Three Ixxntxx Motifs Coordinating Bromide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br1034

b:11.8
occ:0.33
ND2 A:ASN19 3.4 8.5 1.0
CB A:ASN19 3.9 6.9 1.0
CG A:ASN19 4.2 8.0 1.0
CG1 A:ILE16 4.2 9.5 1.0
CA A:ILE16 4.4 9.4 1.0
CG2 A:ILE16 4.6 11.6 1.0
CB A:ILE16 4.6 9.5 1.0
O A:ILE16 5.0 10.1 1.0

Bromine binding site 3 out of 3 in 2wq1

Go back to Bromine Binding Sites List in 2wq1
Bromine binding site 3 out of 3 in the GCN4 Leucine Zipper Mutant with Three Ixxntxx Motifs Coordinating Bromide


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 3 of GCN4 Leucine Zipper Mutant with Three Ixxntxx Motifs Coordinating Bromide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br1035

b:8.7
occ:0.33
ND2 A:ASN26 3.4 6.7 1.0
CB A:ASN26 3.9 5.8 1.0
CG1 A:ILE23 4.0 5.6 1.0
CA A:ILE23 4.1 5.0 1.0
CG A:ASN26 4.2 5.9 1.0
CG2 A:ILE23 4.3 6.7 1.0
CB A:ILE23 4.3 5.6 1.0
O A:ILE23 4.7 5.8 1.0
C A:ILE23 4.9 5.2 1.0
N A:ILE23 5.0 5.1 1.0

Reference:

M.D.Hartmann, O.Ridderbusch, K.Zeth, R.Albrecht, O.Testa, D.N.Woolfson, G.Sauer, S.Dunin-Horkawicz, A.N.Lupas, B.H.Alvarez. A Coiled-Coil Motif That Sequesters Ions to the Hydrophobic Core. Proc.Natl.Acad.Sci.Usa V. 106 16950 2009.
ISSN: ISSN 0027-8424
PubMed: 19805097
DOI: 10.1073/PNAS.0907256106
Page generated: Wed Jul 10 18:53:50 2024

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