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Bromine in PDB 3g99: Gr Dna Binding Domain:Pal Complex-9

Protein crystallography data

The structure of Gr Dna Binding Domain:Pal Complex-9, PDB code: 3g99 was solved by M.A.Pufall, K.R.Yamamoto, S.H.Meijsing, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.57 / 1.81
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 116.774, 38.189, 97.064, 90.00, 123.11, 90.00
R / Rfree (%) 19.1 / 23

Other elements in 3g99:

The structure of Gr Dna Binding Domain:Pal Complex-9 also contains other interesting chemical elements:

Zinc (Zn) 4 atoms

Bromine Binding Sites:

The binding sites of Bromine atom in the Gr Dna Binding Domain:Pal Complex-9 (pdb code 3g99). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Gr Dna Binding Domain:Pal Complex-9, PDB code: 3g99:

Bromine binding site 1 out of 1 in 3g99

Go back to Bromine Binding Sites List in 3g99
Bromine binding site 1 out of 1 in the Gr Dna Binding Domain:Pal Complex-9


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Gr Dna Binding Domain:Pal Complex-9 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Br17

b:0.1
occ:1.00
C5 C:DT8 2.4 68.3 1.0
C6 C:DT8 3.0 60.7 1.0
C2' C:DA7 3.4 67.8 1.0
C4 C:DT8 3.5 66.7 1.0
C8 C:DA7 3.7 66.1 1.0
N9 C:DA7 3.8 65.2 1.0
O4 C:DT8 3.8 67.4 1.0
N7 C:DA7 4.1 67.5 1.0
C1' C:DA7 4.2 63.1 1.0
C4 C:DA7 4.2 54.3 1.0
N1 C:DT8 4.3 64.6 1.0
C5 C:DA7 4.3 63.8 1.0
N3 C:DT8 4.7 66.9 1.0
OP2 C:DT8 4.7 79.1 1.0
C3' C:DA7 4.7 65.2 1.0
N3 C:DA7 4.9 55.5 1.0
C7 C:DT9 4.9 81.7 1.0

Reference:

S.H.Meijsing, M.A.Pufall, A.Y.So, D.L.Bates, L.Chen, K.R.Yamamoto. Dna Binding Site Sequence Directs Glucocorticoid Receptor Structure and Activity. Science V. 324 407 2009.
ISSN: ISSN 0036-8075
PubMed: 19372434
DOI: 10.1126/SCIENCE.1164265
Page generated: Wed Jul 10 19:33:21 2024

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