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Bromine in PDB 3zpt: Design and Synthesis of P1-P3 Macrocyclic Tertiary Alcohol Comprising Hiv-1 Protease Inhibitors

Enzymatic activity of Design and Synthesis of P1-P3 Macrocyclic Tertiary Alcohol Comprising Hiv-1 Protease Inhibitors

All present enzymatic activity of Design and Synthesis of P1-P3 Macrocyclic Tertiary Alcohol Comprising Hiv-1 Protease Inhibitors:
3.4.23.16;

Protein crystallography data

The structure of Design and Synthesis of P1-P3 Macrocyclic Tertiary Alcohol Comprising Hiv-1 Protease Inhibitors, PDB code: 3zpt was solved by A.Joshi, J.B.Veron, J.Unge, A.Rosenquist, H.Wallberg, B.Samuelsson, A.Hallberg, M.Larhed, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.10 / 1.54
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 58.200, 85.920, 46.270, 90.00, 90.00, 90.00
R / Rfree (%) 22.373 / 24.185

Other elements in 3zpt:

The structure of Design and Synthesis of P1-P3 Macrocyclic Tertiary Alcohol Comprising Hiv-1 Protease Inhibitors also contains other interesting chemical elements:

Chlorine (Cl) 3 atoms

Bromine Binding Sites:

The binding sites of Bromine atom in the Design and Synthesis of P1-P3 Macrocyclic Tertiary Alcohol Comprising Hiv-1 Protease Inhibitors (pdb code 3zpt). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Design and Synthesis of P1-P3 Macrocyclic Tertiary Alcohol Comprising Hiv-1 Protease Inhibitors, PDB code: 3zpt:

Bromine binding site 1 out of 1 in 3zpt

Go back to Bromine Binding Sites List in 3zpt
Bromine binding site 1 out of 1 in the Design and Synthesis of P1-P3 Macrocyclic Tertiary Alcohol Comprising Hiv-1 Protease Inhibitors


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Design and Synthesis of P1-P3 Macrocyclic Tertiary Alcohol Comprising Hiv-1 Protease Inhibitors within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Br1202

b:53.6
occ:1.00
 BR1 B:M8Y1202 0.0 53.6 1.0
C22 B:M8Y1202 1.9 23.8 1.0
C23 B:M8Y1202 2.9 21.9 1.0
C21 B:M8Y1202 2.9 23.0 1.0
O B:HOH2087 3.5 14.8 1.0
CB A:PRO81 3.8 10.0 1.0
O B:GLY148 3.8 7.7 1.0
C B:GLY148 3.9 5.6 1.0
CA B:GLY148 4.0 5.8 1.0
CG A:PRO81 4.2 14.0 1.0
C24 B:M8Y1202 4.2 10.0 1.0
C20 B:M8Y1202 4.2 20.8 1.0
CZ B:PHE153 4.3 24.2 1.0
N B:GLY149 4.4 8.5 1.0
O B:GLY149 4.5 8.7 1.0
C11 B:M8Y1202 4.7 14.2 1.0
CE2 B:PHE153 4.8 24.0 1.0
CE1 B:PHE153 4.9 19.7 1.0
N B:GLY148 4.9 7.0 1.0
CA B:GLY149 5.0 8.6 1.0
O5 B:M8Y1202 5.0 10.6 1.0
C B:GLY149 5.0 7.7 1.0

Reference:

A.Joshi, J.B.Veron, J.Unge, A.Rosenquist, H.Wallberg, B.Samuelsson, A.Hallberg, M.Larhed. Design and Synthesis of P1-P3 Macrocyclic Tertiary Alcohol Comprising Hiv-1 Protease Inhibitors J.Med.Chem. V. 56 8999 2013.
ISSN: ISSN 0022-2623
PubMed: 24160253
DOI: 10.1021/JM400811D
Page generated: Mon Jul 7 06:10:29 2025

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