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Bromine in PDB 5ii0: Crystal Structure of the Human Calcitonin Receptor Ectodomain in Complex with A Truncated Salmon Calcitonin Analogue

Protein crystallography data

The structure of Crystal Structure of the Human Calcitonin Receptor Ectodomain in Complex with A Truncated Salmon Calcitonin Analogue, PDB code: 5ii0 was solved by E.Johansson, S.Reedtz-Runge, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.84 / 2.10
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 96.558, 113.165, 55.424, 90.00, 114.79, 90.00
R / Rfree (%) 17 / 20.6

Other elements in 5ii0:

The structure of Crystal Structure of the Human Calcitonin Receptor Ectodomain in Complex with A Truncated Salmon Calcitonin Analogue also contains other interesting chemical elements:

Sodium (Na) 1 atom

Bromine Binding Sites:

The binding sites of Bromine atom in the Crystal Structure of the Human Calcitonin Receptor Ectodomain in Complex with A Truncated Salmon Calcitonin Analogue (pdb code 5ii0). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 2 binding sites of Bromine where determined in the Crystal Structure of the Human Calcitonin Receptor Ectodomain in Complex with A Truncated Salmon Calcitonin Analogue, PDB code: 5ii0:
Jump to Bromine binding site number: 1; 2;

Bromine binding site 1 out of 2 in 5ii0

Go back to Bromine Binding Sites List in 5ii0
Bromine binding site 1 out of 2 in the Crystal Structure of the Human Calcitonin Receptor Ectodomain in Complex with A Truncated Salmon Calcitonin Analogue


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Crystal Structure of the Human Calcitonin Receptor Ectodomain in Complex with A Truncated Salmon Calcitonin Analogue within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Br22

b:0.6
occ:1.00
BR D:4BF22 0.0 0.6 1.0
CZ D:4BF22 1.9 93.1 1.0
CE2 D:4BF22 2.9 83.4 1.0
CE1 D:4BF22 2.9 82.1 1.0
CD2 A:LEU40 3.9 65.7 1.0
CD2 D:4BF22 4.2 74.6 1.0
CD1 D:4BF22 4.2 72.7 1.0
CG D:4BF22 4.7 67.4 1.0
CB A:PRO100 5.0 46.5 1.0

Bromine binding site 2 out of 2 in 5ii0

Go back to Bromine Binding Sites List in 5ii0
Bromine binding site 2 out of 2 in the Crystal Structure of the Human Calcitonin Receptor Ectodomain in Complex with A Truncated Salmon Calcitonin Analogue


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Crystal Structure of the Human Calcitonin Receptor Ectodomain in Complex with A Truncated Salmon Calcitonin Analogue within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Br22

b:0.3
occ:1.00
BR F:4BF22 0.0 0.3 1.0
CZ F:4BF22 1.9 0.5 1.0
CE2 F:4BF22 2.9 0.3 1.0
CE1 F:4BF22 2.9 0.1 1.0
C C:PRO100 4.0 36.6 1.0
N C:ASP101 4.0 29.1 1.0
O C:PRO100 4.0 31.8 1.0
CB C:PRO100 4.0 43.0 1.0
CB C:ASP101 4.0 28.1 1.0
CA C:ASP101 4.1 32.0 1.0
CD2 F:4BF22 4.2 0.2 1.0
CD1 F:4BF22 4.2 1.0 1.0
CG C:PRO100 4.6 47.1 1.0
CA C:PRO100 4.7 36.4 1.0
CG F:4BF22 4.7 0.5 1.0

Reference:

E.Johansson, J.L.Hansen, A.M.Hansen, A.C.Shaw, P.Becker, L.Schaffer, S.Reedtz-Runge. Type II Turn of Receptor-Bound Salmon Calcitonin Revealed By X-Ray Crystallography. J.Biol.Chem. V. 291 13689 2016.
ISSN: ESSN 1083-351X
PubMed: 27189946
DOI: 10.1074/JBC.M116.726034
Page generated: Thu Jul 11 00:04:30 2024

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