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Bromine in PDB 5pbc: Pandda Analysis Group Deposition -- Crystal Structure of BAZ2B in Complex with N09724A

Protein crystallography data

The structure of Pandda Analysis Group Deposition -- Crystal Structure of BAZ2B in Complex with N09724A, PDB code: 5pbc was solved by N.M.Pearce, T.Krojer, R.Talon, A.R.Bradley, M.Fairhead, R.Sethi, N.Wright, E.Maclean, P.Collins, J.Brandao-Neto, A.Douangamath, Z.Renjie, A.Dias, M.Vollmar, J.Ng, P.E.Brennan, O.Cox, C.Bountra, C.H.Arrowsmith, A.Edwards, F.Von Delft, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.94 / 1.77
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 82.320, 96.714, 57.871, 90.00, 90.00, 90.00
R / Rfree (%) 18.2 / 21.5

Bromine Binding Sites:

The binding sites of Bromine atom in the Pandda Analysis Group Deposition -- Crystal Structure of BAZ2B in Complex with N09724A (pdb code 5pbc). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Pandda Analysis Group Deposition -- Crystal Structure of BAZ2B in Complex with N09724A, PDB code: 5pbc:

Bromine binding site 1 out of 1 in 5pbc

Go back to Bromine Binding Sites List in 5pbc
Bromine binding site 1 out of 1 in the Pandda Analysis Group Deposition -- Crystal Structure of BAZ2B in Complex with N09724A


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Pandda Analysis Group Deposition -- Crystal Structure of BAZ2B in Complex with N09724A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br2003

b:36.4
occ:0.24
BR01 A:ES32003 0.0 36.4 0.2
C1 A:EDO2001 0.8 35.3 0.6
C2 A:EDO2001 1.7 31.1 0.6
O1 A:EDO2001 1.8 38.2 0.6
C02 A:ES32003 1.9 31.2 0.4
O2 A:EDO2001 2.2 24.4 0.6
C03 A:ES32003 2.9 33.7 0.4
N06 A:ES32003 2.9 31.4 0.4
H03 A:ES32003 3.1 40.5 0.4
CD2 A:PHE1943 3.6 31.7 1.0
CE1 A:TYR1901 3.8 28.4 1.0
O A:HOH2293 3.9 41.0 0.6
N04 A:ES32003 4.0 26.0 0.4
C05 A:ES32003 4.0 26.4 0.4
CE2 A:PHE1943 4.0 35.4 1.0
CD1 A:TYR1901 4.0 27.5 1.0
O A:HOH2207 4.1 44.8 0.6
O A:HOH2207 4.2 46.6 0.4
ND2 A:ASN1944 4.2 28.2 1.0
O A:HOH2256 4.3 51.2 1.0
OD1 A:ASN1944 4.3 31.9 1.0
O A:HOH2118 4.3 26.1 1.0
CG2 A:VAL1893 4.4 25.2 1.0
CG1 A:VAL1898 4.5 31.2 1.0
CG1 A:VAL1893 4.5 31.7 1.0
CG A:PHE1943 4.6 27.1 1.0
CG A:ASN1944 4.7 32.6 1.0
CZ A:TYR1901 4.8 30.7 1.0
HN04 A:ES32003 4.8 31.2 0.4
H05 A:ES32003 4.9 31.7 0.4
CB A:PHE1943 4.9 28.8 1.0

Reference:

N.M.Pearce, T.Krojer, A.R.Bradley, P.Collins, R.P.Nowak, R.Talon, B.D.Marsden, S.Kelm, J.Shi, C.M.Deane, F.Von Delft. A Multi-Crystal Method For Extracting Obscured Crystallographic States From Conventionally Uninterpretable Electron Density. Nat Commun V. 8 15123 2017.
ISSN: ESSN 2041-1723
PubMed: 28436492
DOI: 10.1038/NCOMMS15123
Page generated: Thu Jul 11 00:38:23 2024

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