Atomistry » Bromine » PDB 6e4l-6h45 » 6f01
Atomistry »
  Bromine »
    PDB 6e4l-6h45 »
      6f01 »

Bromine in PDB 6f01: Arabidopsis Thaliana GSTF9, GSO3 and Gsoh Bound

Enzymatic activity of Arabidopsis Thaliana GSTF9, GSO3 and Gsoh Bound

All present enzymatic activity of Arabidopsis Thaliana GSTF9, GSO3 and Gsoh Bound:
2.5.1.18;

Protein crystallography data

The structure of Arabidopsis Thaliana GSTF9, GSO3 and Gsoh Bound, PDB code: 6f01 was solved by M.A.Tossounian, K.Wahni, I.Van Molle, D.Vertommen, L.Rosado, J.Messens, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 66.84 / 2.50
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 114.760, 114.760, 90.310, 90.00, 90.00, 120.00
R / Rfree (%) 16.4 / 20.9

Bromine Binding Sites:

The binding sites of Bromine atom in the Arabidopsis Thaliana GSTF9, GSO3 and Gsoh Bound (pdb code 6f01). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 2 binding sites of Bromine where determined in the Arabidopsis Thaliana GSTF9, GSO3 and Gsoh Bound, PDB code: 6f01:
Jump to Bromine binding site number: 1; 2;

Bromine binding site 1 out of 2 in 6f01

Go back to Bromine Binding Sites List in 6f01
Bromine binding site 1 out of 2 in the Arabidopsis Thaliana GSTF9, GSO3 and Gsoh Bound


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Arabidopsis Thaliana GSTF9, GSO3 and Gsoh Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br302

b:49.7
occ:1.00
N A:VAL32 3.5 31.6 1.0
CA A:GLY7 3.5 37.8 1.0
CD A:PRO8 3.5 28.8 1.0
N A:HIS9 3.6 39.0 1.0
C A:GLY7 3.6 39.4 1.0
CB A:HIS9 3.7 47.3 1.0
N A:PRO8 3.7 36.8 1.0
CE1 A:PHE10 3.7 42.0 1.0
CA A:PRO31 3.7 31.7 1.0
ND1 A:HIS9 3.9 70.7 1.0
CG A:HIS9 4.0 60.3 1.0
CD1 A:PHE10 4.1 41.9 1.0
C A:PRO31 4.1 39.6 1.0
O A:VAL32 4.1 48.7 1.0
O A:GLY7 4.2 39.2 1.0
CB A:PRO31 4.2 34.8 1.0
CA A:HIS9 4.2 40.3 1.0
N A:GLY7 4.4 40.4 1.0
CG A:PRO8 4.4 33.2 1.0
CA A:VAL32 4.5 43.1 1.0
C A:PRO8 4.6 33.4 1.0
CA A:PRO8 4.7 34.5 1.0
C A:VAL32 4.7 44.4 1.0
CZ A:PHE10 4.7 43.1 1.0
N A:PRO31 4.9 35.1 1.0
CE1 A:HIS9 4.9 72.5 1.0
CB A:VAL32 4.9 46.2 1.0
CD2 A:HIS9 4.9 62.5 1.0
N A:PHE10 5.0 32.0 1.0

Bromine binding site 2 out of 2 in 6f01

Go back to Bromine Binding Sites List in 6f01
Bromine binding site 2 out of 2 in the Arabidopsis Thaliana GSTF9, GSO3 and Gsoh Bound


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Arabidopsis Thaliana GSTF9, GSO3 and Gsoh Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Br304

b:52.8
occ:1.00
CD B:PRO8 3.3 30.3 1.0
N B:VAL32 3.5 39.0 1.0
CA B:GLY7 3.5 29.7 1.0
N B:HIS9 3.5 49.8 1.0
C B:GLY7 3.5 31.1 1.0
N B:PRO8 3.5 32.3 1.0
CA B:PRO31 3.6 37.9 1.0
CE2 B:PHE10 3.7 52.1 1.0
CB B:HIS9 3.8 51.6 1.0
O B:VAL32 4.0 37.1 1.0
CG B:HIS9 4.0 54.4 1.0
O B:HOH2068 4.0 57.7 1.0
C B:PRO31 4.1 45.4 1.0
CD2 B:PHE10 4.1 48.9 1.0
ND1 B:HIS9 4.1 54.8 1.0
CG B:PRO8 4.1 33.5 1.0
CB B:PRO31 4.1 36.1 1.0
O B:GLY7 4.2 33.9 1.0
CA B:HIS9 4.2 52.2 0.9
N B:GLY7 4.4 36.4 1.0
C B:PRO8 4.5 47.9 1.0
CA B:PRO8 4.5 37.5 1.0
CA B:VAL32 4.5 37.1 1.0
C B:VAL32 4.6 41.3 1.0
CD2 B:HIS9 4.7 52.4 1.0
N B:PRO31 4.8 46.3 1.0
CZ B:PHE10 4.8 49.4 1.0
O B:ILE30 4.9 52.6 1.0
CE1 B:HIS9 4.9 52.0 1.0

Reference:

M.A.Tossounian, K.Wahni, I.Van Molle, D.Vertommen, L.Astolfi Rosado, J.Messens. Redox-Regulated Methionine Oxidation of Arabidopsis Thaliana Glutathione Transferase PHI9 Induces H-Site Flexibility. Protein Sci. V. 28 56 2019.
ISSN: ESSN 1469-896X
PubMed: 29732642
DOI: 10.1002/PRO.3440
Page generated: Thu Jul 11 01:53:20 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy