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Bromine in PDB 6pcr: E. Coli 50S Ribosome Bound to Compound 40O

Bromine Binding Sites:

The binding sites of Bromine atom in the E. Coli 50S Ribosome Bound to Compound 40O (pdb code 6pcr). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the E. Coli 50S Ribosome Bound to Compound 40O, PDB code: 6pcr:

Bromine binding site 1 out of 1 in 6pcr

Go back to Bromine Binding Sites List in 6pcr
Bromine binding site 1 out of 1 in the E. Coli 50S Ribosome Bound to Compound 40O


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of E. Coli 50S Ribosome Bound to Compound 40O within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Br3001

b:59.6
occ:1.00
BR35 I:O8P3001 0.0 59.6 1.0
C34 I:O8P3001 1.9 59.6 1.0
N36 I:O8P3001 2.8 59.6 1.0
C33 I:O8P3001 2.8 59.6 1.0
N3 I:A2450 3.3 55.5 1.0
C2 I:A2450 3.4 55.5 1.0
C4' I:C2064 3.6 55.6 1.0
O4' I:C2064 3.8 55.6 1.0
N2 I:OMG2251 3.8 55.9 1.0
C5' I:C2064 4.1 55.6 1.0
C37 I:O8P3001 4.1 59.6 1.0
C32 I:O8P3001 4.2 59.6 1.0
C2 I:OMG2251 4.4 55.9 1.0
N1 I:OMG2251 4.5 55.9 1.0
O4' I:A2451 4.5 56.7 1.0
O2' I:C2064 4.5 55.6 1.0
C1' I:C2064 4.6 55.6 1.0
C4 I:A2450 4.6 55.5 1.0
N1 I:A2450 4.6 55.5 1.0
C38 I:O8P3001 4.7 59.6 1.0
C3' I:C2064 4.8 55.6 1.0
O2' I:A2450 4.8 55.5 1.0
C1' I:A2451 4.9 56.7 1.0
C2' I:C2064 5.0 55.6 1.0

Reference:

J.Pellegrino, Q.Li, D.J.Lee, A.A.Tran, R.Wang, J.E.Park, J.Kaijie, D.Chow, N.Zhang, A.F.Brilot, J.T.Biel, G.Van Zundert, K.Borrelli, D.Shinabarger, C.Wolfe, B.Murray, M.P.Jacobson, I.B.Seiple, J.S.Fraser. Synthesis and Mechanism of Action of Group A Streptogramin Antibiotics That Overcome Resistance To Be Published.
Page generated: Mon Jul 7 10:13:10 2025

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