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Bromine in PDB 6qog: Crystal Structure of Trmd, A Trna-(N1G37) Methyltransferase, From Mycobacterium Abscessus in Complex with Fragment 10 (2-Amino-5- Bromobenzothiazole)

Enzymatic activity of Crystal Structure of Trmd, A Trna-(N1G37) Methyltransferase, From Mycobacterium Abscessus in Complex with Fragment 10 (2-Amino-5- Bromobenzothiazole)

All present enzymatic activity of Crystal Structure of Trmd, A Trna-(N1G37) Methyltransferase, From Mycobacterium Abscessus in Complex with Fragment 10 (2-Amino-5- Bromobenzothiazole):
2.1.1.228;

Protein crystallography data

The structure of Crystal Structure of Trmd, A Trna-(N1G37) Methyltransferase, From Mycobacterium Abscessus in Complex with Fragment 10 (2-Amino-5- Bromobenzothiazole), PDB code: 6qog was solved by S.E.Thomas, A.J.Whitehouse, A.G.Coyne, C.Abell, V.Mendes, T.L.Blundell, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 53.75 / 1.55
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 73.750, 78.513, 86.707, 90.00, 90.00, 90.00
R / Rfree (%) 17.9 / 20.1

Bromine Binding Sites:

The binding sites of Bromine atom in the Crystal Structure of Trmd, A Trna-(N1G37) Methyltransferase, From Mycobacterium Abscessus in Complex with Fragment 10 (2-Amino-5- Bromobenzothiazole) (pdb code 6qog). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Crystal Structure of Trmd, A Trna-(N1G37) Methyltransferase, From Mycobacterium Abscessus in Complex with Fragment 10 (2-Amino-5- Bromobenzothiazole), PDB code: 6qog:

Bromine binding site 1 out of 1 in 6qog

Go back to Bromine Binding Sites List in 6qog
Bromine binding site 1 out of 1 in the Crystal Structure of Trmd, A Trna-(N1G37) Methyltransferase, From Mycobacterium Abscessus in Complex with Fragment 10 (2-Amino-5- Bromobenzothiazole)


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Crystal Structure of Trmd, A Trna-(N1G37) Methyltransferase, From Mycobacterium Abscessus in Complex with Fragment 10 (2-Amino-5- Bromobenzothiazole) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br301

b:91.1
occ:1.00
 BR1 A:JA8301 0.0 91.1 1.0
C02 A:JA8301 1.9 37.6 1.0
C03 A:JA8301 2.8 30.3 1.0
C11 A:JA8301 2.9 34.6 1.0
O A:TYR111 3.1 39.7 1.0
O A:ASN139 3.5 28.4 1.0
C A:ARG110 3.8 28.5 1.0
O A:HOH427 3.9 52.1 1.0
CA A:ARG110 3.9 25.8 1.0
O A:ARG110 3.9 27.1 1.0
CA A:GLY140 3.9 23.5 1.0
O A:HOH523 4.0 47.3 1.0
C A:ASN139 4.0 26.0 1.0
O A:GLY109 4.1 24.1 1.0
C A:TYR111 4.1 38.5 1.0
N A:ARG110 4.2 24.7 1.0
C04 A:JA8301 4.2 27.5 1.0
C A:GLY109 4.2 27.0 1.0
N A:GLY140 4.2 24.4 1.0
C10 A:JA8301 4.2 31.0 1.0
N A:GLY113 4.3 27.6 1.0
N A:TYR111 4.3 29.8 1.0
O A:HOH547 4.3 61.6 1.0
O A:LEU138 4.6 27.4 1.0
CA A:GLY113 4.7 27.4 1.0
C A:GLU112 4.7 33.6 1.0
C05 A:JA8301 4.7 25.1 1.0
C A:GLY140 4.8 23.8 1.0
CA A:GLU112 4.8 35.9 1.0
N A:GLU112 4.9 31.4 1.0
CA A:TYR111 4.9 31.4 1.0
CA A:ASN139 5.0 27.4 1.0
O A:HOH536 5.0 35.6 1.0

Reference:

S.E.Thomas, A.J.Whitehouse, A.G.Coyne, C.Abell, V.Mendes, T.L.Blundell. Crystal Structure of Trmd, A Trna-(N1G37) Methyltransferase, From Mycobacterium Abscessus To Be Published.
Page generated: Mon Jul 7 10:17:40 2025

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