Atomistry » Bromine » PDB 6rqb-6ts9 » 6tlp
Atomistry »
  Bromine »
    PDB 6rqb-6ts9 »
      6tlp »

Bromine in PDB 6tlp: Human CK2 Kinase Alpha Subunit in Complex with the Atp-Competitive Inhibitor 5,6-Dibromobenzotriazole

Enzymatic activity of Human CK2 Kinase Alpha Subunit in Complex with the Atp-Competitive Inhibitor 5,6-Dibromobenzotriazole

All present enzymatic activity of Human CK2 Kinase Alpha Subunit in Complex with the Atp-Competitive Inhibitor 5,6-Dibromobenzotriazole:
2.7.11.1;

Protein crystallography data

The structure of Human CK2 Kinase Alpha Subunit in Complex with the Atp-Competitive Inhibitor 5,6-Dibromobenzotriazole, PDB code: 6tlp was solved by H.Czapinska, A.Piasecka, M.Winiewska-Szajewska, M.Bochtler, J.Poznanski, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.18 / 1.93
Space group P 42 21 2
Cell size a, b, c (Å), α, β, γ (°) 127.224, 127.224, 60.881, 90.00, 90.00, 90.00
R / Rfree (%) 15.3 / 18.9

Bromine Binding Sites:

The binding sites of Bromine atom in the Human CK2 Kinase Alpha Subunit in Complex with the Atp-Competitive Inhibitor 5,6-Dibromobenzotriazole (pdb code 6tlp). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 2 binding sites of Bromine where determined in the Human CK2 Kinase Alpha Subunit in Complex with the Atp-Competitive Inhibitor 5,6-Dibromobenzotriazole, PDB code: 6tlp:
Jump to Bromine binding site number: 1; 2;

Bromine binding site 1 out of 2 in 6tlp

Go back to Bromine Binding Sites List in 6tlp
Bromine binding site 1 out of 2 in the Human CK2 Kinase Alpha Subunit in Complex with the Atp-Competitive Inhibitor 5,6-Dibromobenzotriazole


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Human CK2 Kinase Alpha Subunit in Complex with the Atp-Competitive Inhibitor 5,6-Dibromobenzotriazole within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br401

b:40.6
occ:1.00
BR1 A:7M0401 0.0 40.6 1.0
C1 A:7M0401 1.9 33.1 1.0
C4 A:7M0401 2.9 32.4 1.0
C2 A:7M0401 2.9 30.9 1.0
BR2 A:7M0401 3.3 31.5 1.0
CG1 A:VAL66 3.9 29.4 1.0
CG2 A:VAL116 4.0 43.9 1.0
CG1 A:VAL53 4.1 39.5 0.6
CG1 A:VAL53 4.1 37.6 0.4
C6 A:7M0401 4.1 30.9 1.0
C3 A:7M0401 4.2 29.7 1.0
CE A:MET163 4.2 42.8 1.0
CG2 A:VAL66 4.4 29.9 1.0
CD1 A:LEU45 4.5 46.6 0.4
SD A:MET163 4.5 41.4 1.0
CD1 A:LEU45 4.5 43.5 0.6
CG A:MET163 4.6 37.3 1.0
CD1 A:ILE174 4.6 26.2 1.0
CD A:ARG47 4.6 45.4 0.6
O A:HOH870 4.6 48.2 0.4
C7 A:7M0401 4.7 30.0 1.0
CB A:VAL66 4.7 29.7 1.0
OD1 A:ASN118 5.0 56.2 1.0
NE A:ARG47 5.0 43.5 0.6

Bromine binding site 2 out of 2 in 6tlp

Go back to Bromine Binding Sites List in 6tlp
Bromine binding site 2 out of 2 in the Human CK2 Kinase Alpha Subunit in Complex with the Atp-Competitive Inhibitor 5,6-Dibromobenzotriazole


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Human CK2 Kinase Alpha Subunit in Complex with the Atp-Competitive Inhibitor 5,6-Dibromobenzotriazole within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br401

b:31.5
occ:1.00
BR2 A:7M0401 0.0 31.5 1.0
C2 A:7M0401 1.9 30.9 1.0
C3 A:7M0401 2.8 29.7 1.0
C1 A:7M0401 2.9 33.1 1.0
BR1 A:7M0401 3.3 40.6 1.0
CD1 A:ILE95 3.5 26.6 1.0
CG2 A:VAL116 3.6 43.9 1.0
CG1 A:ILE95 3.7 25.7 1.0
CB A:PHE113 3.8 25.5 1.0
CG1 A:VAL66 3.9 29.4 1.0
CB A:VAL66 3.9 29.7 1.0
O A:GLU114 4.0 30.4 0.7
CG2 A:VAL66 4.1 29.9 1.0
CG A:PHE113 4.1 25.1 1.0
C7 A:7M0401 4.1 30.0 1.0
C4 A:7M0401 4.2 32.4 1.0
O A:GLU114 4.3 30.6 0.3
CD2 A:PHE113 4.4 25.0 1.0
CG2 A:ILE174 4.4 25.6 1.0
CG1 A:VAL116 4.6 43.2 1.0
C6 A:7M0401 4.6 30.9 1.0
CB A:VAL116 4.7 42.8 1.0
CD1 A:PHE113 4.8 24.4 1.0

Reference:

H.Czapinska, A.Piasecka, M.Winiewska-Szajewska, M.Bochtler, J.Poznanski. Binding of Bromobenzotriazoles By the Catalytic Subunit of Human Protein Kinase CK2: Structural and Thermodynamics Studies. To Be Published.
Page generated: Mon Jul 7 10:26:36 2025

Last articles

Zn in 4Y7O
Zn in 4Y86
Zn in 4Y52
Zn in 4Y7L
Zn in 4Y6Q
Zn in 4Y6O
Zn in 4Y6L
Zn in 4Y2B
Zn in 4XXO
Zn in 4Y06
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy