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Bromine in PDB 6y8i: Fragment KCL_I013 in Complex with Il-1-Beta

Protein crystallography data

The structure of Fragment KCL_I013 in Complex with Il-1-Beta, PDB code: 6y8i was solved by G.F.De Nicola, C.E.Nichols, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.50 / 1.46
Space group P 43
Cell size a, b, c (Å), α, β, γ (°) 54.790, 54.790, 75.570, 90.00, 90.00, 90.00
R / Rfree (%) 23.9 / 26.3

Bromine Binding Sites:

The binding sites of Bromine atom in the Fragment KCL_I013 in Complex with Il-1-Beta (pdb code 6y8i). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Fragment KCL_I013 in Complex with Il-1-Beta, PDB code: 6y8i:

Bromine binding site 1 out of 1 in 6y8i

Go back to Bromine Binding Sites List in 6y8i
Bromine binding site 1 out of 1 in the Fragment KCL_I013 in Complex with Il-1-Beta


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Fragment KCL_I013 in Complex with Il-1-Beta within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br202

b:34.8
occ:0.71
BR A:OGE202 0.0 34.8 0.7
C7 A:OGE202 1.9 28.1 0.7
C5 A:OGE202 2.8 29.5 0.7
C6 A:OGE202 2.8 28.5 0.7
C A:ASN108 3.5 34.8 1.0
O A:ASN108 3.5 37.6 1.0
N A:LYS109 3.7 35.2 1.0
O A:LYS109 3.8 34.4 1.0
C A:LYS109 3.8 34.3 1.0
CD2 A:LEU110 3.8 32.7 1.0
CA A:LYS109 3.9 35.2 1.0
CG A:LEU110 3.9 28.5 1.0
CA A:ASN108 4.0 39.2 1.0
OD1 A:ASN108 4.1 48.0 1.0
N2 A:OGE202 4.1 29.0 0.7
C4 A:OGE202 4.1 30.2 0.7
N A:LEU110 4.4 29.4 1.0
C3 A:OGE202 4.6 31.4 0.7
CB A:GLU105 4.7 39.6 1.0
CG A:ASN108 4.7 48.3 1.0
CD1 A:LEU110 4.8 34.8 1.0
N A:ASN108 5.0 41.5 1.0
CB A:ASN108 5.0 43.3 1.0

Reference:

G.F.De Nicola, C.E.Nichols. Fragment KCL_I013 in Complex with Il-1-Beta To Be Published.
Page generated: Thu Jul 11 03:08:44 2024

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