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Bromine in PDB 2mbj: Structure of An Antiparallel (2+2) G-Quadruplex Formed By Human Telomeric Repeats in Na+ Solution (with G22-to-Brg Substitution)

Bromine Binding Sites:

The binding sites of Bromine atom in the Structure of An Antiparallel (2+2) G-Quadruplex Formed By Human Telomeric Repeats in Na+ Solution (with G22-to-Brg Substitution) (pdb code 2mbj). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Structure of An Antiparallel (2+2) G-Quadruplex Formed By Human Telomeric Repeats in Na+ Solution (with G22-to-Brg Substitution), PDB code: 2mbj:

Bromine binding site 1 out of 1 in 2mbj

Go back to Bromine Binding Sites List in 2mbj
Bromine binding site 1 out of 1 in the Structure of An Antiparallel (2+2) G-Quadruplex Formed By Human Telomeric Repeats in Na+ Solution (with G22-to-Brg Substitution)


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Structure of An Antiparallel (2+2) G-Quadruplex Formed By Human Telomeric Repeats in Na+ Solution (with G22-to-Brg Substitution) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br22

b:0.4
occ:1.00
BR A:BGM22 0.0 0.4 1.0
C8 A:BGM22 1.9 0.3 1.0
H1' A:BGM22 2.8 0.3 1.0
N7 A:BGM22 2.8 0.3 1.0
N9 A:BGM22 2.9 0.2 1.0
H21 A:DG18 3.0 0.3 1.0
C1' A:BGM22 3.4 0.2 1.0
O4' A:DG23 3.5 0.4 1.0
H22 A:DG18 3.6 0.3 1.0
N2 A:DG18 3.6 0.3 1.0
H4' A:DT20 3.7 0.4 1.0
C5 A:BGM22 4.0 0.3 1.0
C4 A:BGM22 4.0 0.2 1.0
H5' A:DT20 4.0 0.5 1.0
H5' A:DG23 4.1 0.5 1.0
H2'' A:BGM22 4.2 0.4 1.0
N9 A:DG23 4.3 0.4 1.0
O4' A:BGM22 4.3 0.2 1.0
C1' A:DG23 4.4 0.4 1.0
C2' A:BGM22 4.5 0.2 1.0
C4 A:DG23 4.5 0.4 1.0
C4' A:DG23 4.6 0.4 1.0
H1' A:DG23 4.6 0.5 1.0
H5'' A:DT20 4.6 0.5 1.0
C4' A:DT20 4.6 0.3 1.0
C5' A:DT20 4.6 0.4 1.0
C8 A:DG23 4.6 0.4 1.0
H4' A:DG23 4.6 0.5 1.0
C5' A:DG23 4.8 0.4 1.0
N3 A:DG23 4.9 0.3 1.0
H2'' A:DT19 4.9 0.6 1.0
H1 A:DG18 4.9 0.4 1.0
C2 A:DG18 4.9 0.3 1.0
H8 A:DG23 4.9 0.5 1.0

Reference:

K.W.Lim, V.C.Ng, N.Martin-Pintado, B.Heddi, A.T.Phan. Structure of the Human Telomere in Na+ Solution: An Antiparallel (2+2) G-Quadruplex Scaffold Reveals Additional Diversity. Nucleic Acids Res. V. 41 10556 2013.
ISSN: ISSN 0305-1048
PubMed: 23999095
DOI: 10.1093/NAR/GKT771
Page generated: Sat Dec 12 02:07:00 2020

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