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Bromine in PDB 4ll0: Egfr L858R/T790M in Complex with PD168393

Enzymatic activity of Egfr L858R/T790M in Complex with PD168393

All present enzymatic activity of Egfr L858R/T790M in Complex with PD168393:
2.7.10.1;

Protein crystallography data

The structure of Egfr L858R/T790M in Complex with PD168393, PDB code: 4ll0 was solved by C.H.Yun, M.J.Eck, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.60 / 4.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 61.640, 72.710, 167.030, 90.00, 90.00, 90.00
R / Rfree (%) 23.8 / 25.7

Bromine Binding Sites:

The binding sites of Bromine atom in the Egfr L858R/T790M in Complex with PD168393 (pdb code 4ll0). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 2 binding sites of Bromine where determined in the Egfr L858R/T790M in Complex with PD168393, PDB code: 4ll0:
Jump to Bromine binding site number: 1; 2;

Bromine binding site 1 out of 2 in 4ll0

Go back to Bromine Binding Sites List in 4ll0
Bromine binding site 1 out of 2 in the Egfr L858R/T790M in Complex with PD168393


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Egfr L858R/T790M in Complex with PD168393 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br1101

b:0.8
occ:1.00
BR A:YUN1101 0.0 0.8 1.0
CAX A:YUN1101 1.9 0.8 1.0
CAH A:YUN1101 2.8 0.6 1.0
CAL A:YUN1101 2.8 0.2 1.0
O A:LEU788 3.8 0.2 1.0
CB A:MET790 3.9 0.4 1.0
O A:ALA743 3.9 0.4 1.0
CB A:LYS745 4.1 0.9 1.0
CAF A:YUN1101 4.1 0.7 1.0
CAY A:YUN1101 4.1 0.7 1.0
SD A:MET790 4.2 0.4 1.0
N A:LYS745 4.3 0.4 1.0
C A:LEU788 4.4 0.2 1.0
C A:ALA743 4.4 0.4 1.0
CB A:LEU788 4.4 0.4 1.0
CE A:MET790 4.5 0.4 1.0
C A:ILE789 4.6 0.6 1.0
C A:ILE744 4.6 0.0 1.0
CG A:MET790 4.6 0.4 1.0
N A:MET790 4.6 0.9 1.0
CB A:ALA743 4.6 1.0 1.0
CAI A:YUN1101 4.6 0.8 1.0
N1 A:YUN1101 4.7 0.6 1.0
CA A:ILE744 4.7 0.0 1.0
O A:ILE789 4.8 0.6 1.0
N A:ILE744 4.8 0.0 1.0
CA A:LYS745 4.9 0.4 1.0
CA A:MET790 4.9 0.9 1.0
N A:ILE789 4.9 0.6 1.0
CA A:ILE789 4.9 0.6 1.0

Bromine binding site 2 out of 2 in 4ll0

Go back to Bromine Binding Sites List in 4ll0
Bromine binding site 2 out of 2 in the Egfr L858R/T790M in Complex with PD168393


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Egfr L858R/T790M in Complex with PD168393 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Br1101

b:0.4
occ:1.00
BR B:YUN1101 0.0 0.4 1.0
CAX B:YUN1101 1.9 0.4 1.0
CAH B:YUN1101 2.8 0.5 1.0
CAL B:YUN1101 2.8 0.4 1.0
O B:ALA743 3.9 0.9 1.0
O B:LEU788 3.9 0.5 1.0
CB B:MET790 3.9 0.4 1.0
CB B:LYS745 4.1 0.2 1.0
CAF B:YUN1101 4.1 0.7 1.0
CAY B:YUN1101 4.1 0.8 1.0
SD B:MET790 4.2 0.4 1.0
N B:LYS745 4.3 0.2 1.0
C B:ALA743 4.4 0.9 1.0
C B:LEU788 4.4 0.5 1.0
CB B:LEU788 4.5 0.2 1.0
C B:ILE744 4.6 0.5 1.0
N B:MET790 4.6 0.0 1.0
CG B:MET790 4.6 0.4 1.0
C B:ILE789 4.6 0.4 1.0
CE B:MET790 4.6 0.4 1.0
CAI B:YUN1101 4.6 0.8 1.0
CB B:ALA743 4.6 0.3 1.0
N1 B:YUN1101 4.6 0.8 1.0
CA B:ILE744 4.7 0.5 1.0
N B:ILE744 4.8 0.5 1.0
CA B:LYS745 4.8 0.2 1.0
N B:ILE789 4.9 0.4 1.0
O B:ILE789 4.9 0.4 1.0
CA B:ILE789 4.9 0.4 1.0
CA B:MET790 4.9 0.0 1.0

Reference:

M.Red Brewer, C.H.Yun, D.Lai, M.A.Lemmon, M.J.Eck, W.Pao. Mechanism For Activation of Mutated Epidermal Growth Factor Receptors in Lung Cancer. Proc.Natl.Acad.Sci.Usa V. 110 E3595 2013.
ISSN: ISSN 0027-8424
PubMed: 24019492
DOI: 10.1073/PNAS.1220050110
Page generated: Wed Jul 10 21:56:34 2024

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